KEGG   Neomicrococcus aestuarii: BHE16_03295
Entry
BHE16_03295       CDS       T04559                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
nae  Neomicrococcus aestuarii
Pathway
nae03030  DNA replication
nae03410  Base excision repair
nae03420  Nucleotide excision repair
nae03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nae00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BHE16_03295
   03410 Base excision repair
    BHE16_03295
   03420 Nucleotide excision repair
    BHE16_03295
   03440 Homologous recombination
    BHE16_03295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nae03032]
    BHE16_03295
   03400 DNA repair and recombination proteins [BR:nae03400]
    BHE16_03295
Enzymes [BR:nae01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BHE16_03295
DNA replication proteins [BR:nae03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BHE16_03295
DNA repair and recombination proteins [BR:nae03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BHE16_03295
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BHE16_03295
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 DNA_pol_A_exo1 DNA_pol_lambd_f HHH
Other DBs
NCBI-ProteinID: APF41680
UniProt: A0A1L2ZR56
Position
complement(750989..753631)
AA seq 880 aa
MAFRAFYALPADSFLTASGQYTNAVHGFISMMLTMIREHQPTYIGVAFDLDTPTFRSEQY
DEYKAGRNKTPEEFKGQIDLIRKVLEAMNIPTISMDGYEADDIIATLATLGEAADMQVLV
VSGDRDAFQLITEKTTVLYPTKGVSQIPPMDAAAIEKKYFVQPNQYSDLAALVGETADNL
PGVPGVGPKTAAKWINLYGGLEGILEHVDEIKGKVGDSLRENLDNVKRNRRLNHLLRDLE
LPVNLESLELEAPNREALEEIFDTLEFNTLRKRVWELFTEEEEEVVEEELPEATILTSAS
EITDWFKAEGSHVLGLYLVTEAPAASNPGMPDDVFALGLASEDQLSYIKLADLDPDAEAA
IASALESVSYKKAVHDYKLAFKQLKERGLTLGGVVDDTMISAYLIQPDRRSHALPDVALH
HLKISLDLSESESKGELDLGLDGKDYSASAARAAFVVRQLSLMLAGQVSERNAASLLAEL
ELPLSQVLARMERVGIAIDLPQLEVLEKDFSKVIDDAKSRAFEAIGHEVNLGSPKQLQVV
LFDELELPKTKKIKTGYTTDAESLTELYAQTNHPFLGALMEYRDATKLKQTVDGLGKAVA
DDGRIHTTYAQTIAATGRLSSLNPNLQNIPVRSEEGRRIREIFVAAEGYETLLTADYSQI
EMRIMAHLSGDEGLIEAFRSGEDLHRFVGSRVFNVDPEEVTPAMRSKVKAMSYGLAYGLS
SFGLSKQLRISVDEARTLQKDYFQRFGGVRDYLRSGVEKARSVGYTETILGRRRYLPDLT
SDNRQLREIAERVALNSPIQGSAADVIKLAMLHIQAELDAQNVKSRMLLQVHDELVFEIA
PGELEIIREIVETKMGDAVEISVPLEVHIGIGKNWNDAGH
NT seq 2643 nt   +upstreamnt  +downstreamnt
atggcgttcagagcgttttatgccctgccagccgacagcttcttgacagcatcagggcag
tacacgaacgccgttcacgggttcatttccatgatgctcaccatgattcgcgagcaccag
ccgacttatatcggtgtggcttttgacctggatacgcccacgttccgctcggaacagtat
gacgagtacaaggccggcagaaacaagacccccgaggaatttaagggccagattgacctg
atccgcaaggtcctcgaagcgatgaacatcccgaccatctcgatggacggctacgaagca
gatgacatcatcgcaactctcgcgaccctcggcgaagccgctgacatgcaagttttggtg
gtgtccggcgaccgcgatgccttccagctgatcacggaaaagacaaccgttctgtacccc
acgaagggtgtttcgcagatccctccgatggacgccgccgccatcgaaaaaaagtacttc
gtgcagccgaatcagtattcggacctcgccgcgctcgtgggtgagaccgcggataacctg
cccggcgtgcctggcgttggaccgaagaccgccgcaaagtggatcaacctgtatggcggg
ctcgagggcatccttgaacacgtcgacgaaatcaagggcaaagtcggcgattcgctgcgt
gagaacctcgataacgtcaagcggaaccgtcgcttgaaccacttgctccgtgaccttgag
ctgccggtcaaccttgaatctcttgaactcgaagcgcccaaccgtgaagcgctcgaggaa
atcttcgacaccctcgaattcaacactctgcgcaagcgcgtgtgggaacttttcactgaa
gaagaggaagaggtcgttgaagaagagctgccagaagcaaccattctgacctccgcttca
gagatcacggactggttcaaggccgagggctcgcatgtattgggcctctacctggtgacg
gaagcgcccgcagcaagcaacccgggcatgcccgatgatgtcttcgcgctaggactcgcg
tctgaggatcagctctcctacatcaagctcgcagatctcgatcctgatgctgaagctgcg
attgcttcggcgctcgaatcggtgagttacaagaaggccgtgcacgactacaagctggct
ttcaaacagctcaaggaacgcggactcacactcggcggcgtggtagacgacaccatgatt
tccgcttacctcattcagccggaccgccgtagtcatgcactgccagatgtggcattgcac
cacttgaagatttccctggacctgagcgagtctgagtccaagggcgagcttgatctgggc
cttgacggcaaggactactcggcctcggccgcccgtgctgccttcgttgtgcgccaactg
agcttgatgcttgccggtcaagtgtctgagcggaacgccgctagcttgttggctgaactc
gagctgccgctctcgcaagtactcgctcggatggagcgcgtgggtattgcgattgatttg
ccgcaacttgaggttctcgaaaaggacttctccaaggtcattgacgacgccaagtctcgc
gcattcgaagcgatcggccacgaggtcaacctgggatctccgaagcaattgcaggttgtc
ctgtttgatgagctcgagcttccaaagaccaagaagatcaagaccggctacaccacggat
gctgagtctctgaccgagctgtacgcgcagacgaaccacccattcttgggtgcgctcatg
gaataccgcgacgccacgaagctcaagcagaccgttgacgggctcgggaaggctgtggcc
gacgacggccgcattcacaccacctatgcgcagaccattgccgcaacgggcagattgtct
tcactcaacccgaacctgcagaacatccccgttcgtagcgaagaaggccgtcgtatccgc
gaaatcttcgtcgcggccgagggatatgaaaccttgctgactgccgactactcgcagatt
gaaatgcgcatcatggcgcacctttccggcgatgaagggcttatcgaggccttccgctcc
ggagaagacttgcaccgttttgtgggttcgcgcgtgttcaacgtggaccccgaagaagtc
actccggcgatgcgctccaaggttaaggcgatgtcctacggccttgcttatgggctgagc
tcatttggcttgagcaagcagctccgcatctccgtggacgaagcccgcacgcttcagaag
gactacttccagcgcttcggcggcgtccgcgattacctccgttcgggagtggagaaggcc
cgctccgttggatacaccgaaaccatcctgggccgccgacgctacttgccggacctcacg
agcgacaaccgtcagcttcgcgaaattgccgaacgagtggcactgaactcgccgattcag
ggatctgcagcagatgtcatcaagctcgcgatgttgcacattcaggccgaactcgacgct
cagaacgttaagtcccgcatgctcttgcaagtccatgacgaattggttttcgaaatcgct
ccgggtgaattggaaattatccgcgagatcgtcgagaccaaaatgggtgacgcggtcgaa
atttccgttccgctcgaggtgcacatcggaatcggcaagaactggaacgacgcaggtcac
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system