KEGG   Candidatus Nucleicultrix amoebiphila: GQ61_08790
Entry
GQ61_08790        CDS       T04833                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
naf  Candidatus Nucleicultrix amoebiphila
Brite
KEGG Orthology (KO) [BR:naf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:naf03032]
    GQ61_08790
   03400 DNA repair and recombination proteins [BR:naf03400]
    GQ61_08790
Enzymes [BR:naf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     GQ61_08790
DNA replication proteins [BR:naf03032]
 Prokaryotic type
  DNA Topoisomerases
   GQ61_08790
DNA repair and recombination proteins [BR:naf03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      GQ61_08790
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim GyrB_hook Toprim_4 GyrB_insert HATPase_c_3
Other DBs
NCBI-ProteinID: ARN85368
UniProt: A0A1W6N6E3
Position
1722818..1725262
AA seq 814 aa
MKNETTSTTPDHIENDEYGAHSIKVLRGLDAVRKRPGMYIGDTDDGSGLHHMVYEVIDNA
VDETLAGYCDRIEVTLNSDGSVTVVDNGRGIPVGIHEEEGVSAAEVIMTQLHAGGKFDQN
SYKVSGGLHGVGVSVVNALSEWLDLTIWQHDKEHFMRFKDGVPEVSLKVVGETPGKTGTR
VVFKPSNQTFTMTNFDYATLEHRFRELAFLNSGVRIILTDLRDSEPKTTELHYEGGIAAF
VHYLDRSKSVLHETPISFTTEQNNIVVDIAMEWTDSYHESVLCFTNNIPQRDGGTHLAGF
RSALTRMIQNYATETGILKKEKIALSGEDAREGLTGVISVKVPDPKFSSQTKDKLVSSEV
RPVVENAVADKLGQWFEEHPAEAKKIIGKVVEAAVAREAARKARELTRRKGVLDLASLPG
KLADCQERDPSQSELFLVEGDSAGGSAKGGRNRRFQAILPLRGKILNVERARFDKMLGSQ
EIGTLIAALGTGIGSEDFTLDKIRYHRIIIMTDADVDGSHIRTLLLTFFFRQMPEIIEKG
YLYIAQPPLYGVKKGSSIIYLKDDRALDEHLLKTGLEGASLDQKSGGRVVGEDLRNLVLN
AQKIKKNIEGLSEKIGSLIVAEQAAILGLFDTEKLSPGNIKTSASALSERLNTLGIGGSQ
EKWSSRVEETTIVLTRSERGVEESFKLTAPMANWSDAYQVKIMQKDLYEFFEHPLKLNLK
DKSLAIYGPKGLYEAIIEQGRKGITIQRFKGLGEMNANQLWDTTLDPDVRTLLQVKITHA
DQAEEVFSMLMGDLVEPRRDFIQANALKVSNLDA
NT seq 2445 nt   +upstreamnt  +downstreamnt
atgaaaaatgaaacgacttcaacgacccctgaccatattgaaaatgatgaatatggtgcc
cattcgattaaagttctaagagggcttgatgcggtccgaaagcggcctggaatgtatatt
ggcgatacagacgatggctcaggtcttcatcacatggtctatgaagtcatagacaacgcc
gttgatgaaacgttagctggatattgtgatcgaatcgaagtgactttgaattcagacggt
tcagtaacggttgtcgataatggtcgtgggattccagttggtattcatgaagaagaagga
gtttcagctgctgaagttatcatgacgcaactccatgctggtggcaaattcgatcaaaat
tcttataaagtttcgggaggtctccacggagttggtgtatctgtggtaaatgctctttct
gaatggttagatctgacaatttggcagcacgataaagagcactttatgcgctttaaggat
ggtgttccggaagtttctttgaaagttgttggagaaacgccagggaaaacaggaacgcgc
gtcgtttttaagccctcgaaccaaacatttacaatgacaaattttgattatgcaacactt
gagcatcgctttcgtgaacttgcatttcttaattctggagttcgtattattctgactgat
ttgagagatagcgagccaaaaactactgaacttcattatgaaggcggtattgctgcattc
gttcactatttagaccgcagtaaaagcgtactacatgaaactcctatcagttttacaact
gagcaaaacaacatcgtggttgatattgctatggagtggactgatagttatcatgaatct
gtcttgtgctttacaaacaatattccacagcgtgatgggggaactcacttagctgggttt
cgttcggctctgacacgtatgattcagaattatgcaacagaaactggcattttaaagaaa
gaaaaaattgcacttagtggtgaagatgcgcgtgaaggattgacaggggttatctcagtg
aaagttcctgatcctaagttttcttcgcaaactaaagataaacttgtgtcgtccgaagtt
cgtcctgttgttgaaaatgctgtagctgataaattgggacagtggtttgaagagcatcca
gctgaagctaaaaaaattattggtaaagttgttgaggcagctgtggcccgtgaggcggca
cgtaaagccagagaactaacacgtcgtaaaggtgtactcgatttagcttctcttccagga
aaacttgctgattgccaagaacgtgatccaagtcagagtgaattgtttctggttgaggga
gatagcgctggtggctcagcaaagggaggtcgcaatcgtcggttccaagcgattcttcct
ttaagaggaaaaattctaaacgttgagcgtgctcgttttgacaagatgctcggttctcaa
gaaattggaacattgattgcagcgctaggaactggaatcggaagtgaagattttacactg
gataaaattcgttatcatcgcattattattatgacggacgctgatgttgatggtagtcac
atccgtacacttttgttgaccttctttttccgacagatgcctgaaatcattgaaaaaggg
tatttatatatcgctcaaccgccactctatggtgttaaaaagggtagttcaatcatttat
ctaaaagatgatcgcgcgttagatgagcacctcttaaaaacaggtctggaaggggcatcc
ctcgaccaaaaatctggaggccgtgttgttggcgaagatttacgtaatttagtgctcaat
gcacagaagattaagaaaaacattgaaggattatctgagaaaattggttcattgattgtt
gcagaacaagctgcaatattagggctatttgatacagaaaaactttccccgggaaatatt
aaaacttcagcaagtgctttatctgaacgactcaatacgcttggtattggaggatctcaa
gaaaaatggtcttctcgcgtggaagagacgactatagtgttgactaggtctgaaaggggt
gtcgaagaaagctttaaattaacagctcctatggctaactggagtgacgcttaccaagtc
aaaataatgcaaaaagacctttatgagttttttgagcatccgttaaaattgaacttgaaa
gataaatcactggccatttatggacctaagggattatatgaagctatcattgagcaaggt
cgcaagggtattacgattcagcgttttaaagggttgggagagatgaatgcgaatcaactg
tgggataccactcttgatccagatgttcgtactttgctacaggtgaaaattacccatgct
gatcaagctgaagaagtcttttctatgctgatgggggatttggtagaaccgcgtcgtgat
tttattcaagctaatgccttgaaagtatcaaacttagacgcataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (54)   

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