KEGG   Necator americanus (New World hookworm): NECAME_04349
Entry
NECAME_04349      CDS       T04867                                 
Name
(RefSeq) 3' exoribonuclease family, domain 1
  KO
K12589  exosome complex component RRP42
Organism
nai  Necator americanus (New World hookworm)
Pathway
nai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NECAME_04349
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nai03019]
    NECAME_04349
Messenger RNA biogenesis [BR:nai03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     NECAME_04349
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     NECAME_04349
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 25344381
NCBI-ProteinID: XP_013295578
UniProt: W2SX02
Position
Unknown
AA seq 304 aa
MEPILLGAAEKHFIAQGFADGVRNDGRGIDDFRLIWIESPAFTTTNGSARVKIDTTDILV
GVKCEVMECEDTSLTPNRLQFTVEPSCIAALRTEAKGGELLTEAIEAVLMEAYHGNGDVI
TNMEKLVLCKQFMWKVYVDIVIQQYGGNILDAIFIAVKAALLDTRITNLALIPQDEGKFS
IECEESTETNFFRLEAANAPLSISVNQIGKSIAVDCTEVEEVLLRTALWVVMDQPENERT
PDDSIRLRVVKQMFPGGMDPRSIPAMLDLAVRSGRKLHAAVNARLEEIKNADGSQVPGLS
FFDE
NT seq 915 nt   +upstreamnt  +downstreamnt
atggaacccattttattaggagctgccgagaaacattttatcgctcaaggcttcgccgat
ggagtccgcaacgacggtcgagggattgatgactttcgactgatctggattgagagcccg
gcttttacaacaactaatggttctgcaagagttaaaattgacaccacagatatactggta
ggtgtcaaatgtgaggttatggaatgtgaggacacttctctgactccaaatcgcctacag
ttcaccgtcgaaccctcttgtatagcagcactccgaacagaagctaaaggtggtgaactt
ttgactgaagcaattgaagcagttttaatggaagcatatcatggaaatggtgacgttatc
acgaatatggaaaagctcgtgttatgcaagcagtttatgtggaaagtgtacgtggatatc
gtcatacaacaatatggagggaacattctggatgccattttcattgctgtgaaagctgct
cttctggatacacgcataactaacctagctctgatccctcaagatgaggggaagttcagc
atagagtgcgaagaatctactgaaacaaactttttccgccttgaggcggcaaacgctcct
ttgtcaatttcggttaatcagattggcaagtctatagctgtagattgcacggaagttgaa
gaagtcttgttacgtactgcactatgggttgtgatggaccaacctgagaatgaaaggact
cctgatgattcgatacgcttacgtgttgtgaagcaaatgtttcctggtggaatggatcct
cgctcaataccagctatgctcgacttggctgtacgaagtggtcggaagttacatgctgca
gtaaatgcacgattagaagagattaaaaatgcggatgggtctcaggttcccggtttgtca
ttttttgatgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system