KEGG T00860: NAMH

Nautilia profundicola: NAMH_1159

Entry

NAMH_1159         CDS       T00860

Symbol

trmA

Name

(GenBank) tRNA (uracil-5-)-methyltransferase

K00557

tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]

Organism

nam Nautilia profundicola

Brite

KEGG Orthology (KO) [BR:nam00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nam03016]
    NAMH_1159 (trmA)
Enzymes [BR:nam01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.35  tRNA (uracil54-C5)-methyltransferase
     NAMH_1159 (trmA)
Transfer RNA biogenesis [BR:nam03016]
Prokaryotic type
  tRNA modification factors
   Methyltransferases
    NAMH_1159 (trmA)

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 Methyltransf_15 MTS Methyltransf_11 Methyltransf_12 Methyltransf_23 RrnaAD DREV Methyltransf_4 Rad10

Other DBs

NCBI-ProteinID:

ACM92923

UniProt:

B9LA97

Position

complement(1072988..1074085)

AA seq 365 aa
MTCSSFGKCGSCVLWEMPYDEQLKMKSEKLKEMFSEFDMPEIEVVHGSDEHFRARAEFRV
WHEGDKSYYAMRKRKEDGRGVIPIEECKIVDKAIYDIMTPLLKEIEKNDNLRFKLYEIDF
LSNSKGELIITLIYHKKVDESIAEDIKKLKEKFKNADFIVRKKGRKYVFDKNYLIEELNI
NSKTYKYKIIENTFSQPNRQMNQKMIEWAMRNSEDLKGDLVELYCGNGNFTIPLSERFNK
VIATEISKESIEAATYNAEINARDNITFLAMSAAEFSKLYKDRSPLITKYDLKNILIDPP
RAGLDDKSREFVNEFDNIIYISCNPETLQRDLKTLAKGREIKAFAFFDQFPYTNHAECGV
ILKKN

NT seq 1098 nt +upstreamnt +downstreamnt
atgacttgtagcagttttggaaaatgcggaagctgtgttttgtgggaaatgccgtatgat
gagcagttaaaaatgaaaagcgaaaaattaaaagagatgttcagtgagtttgatatgcct
gagattgaagtggtacacggaagtgacgagcatttcagggcgagagctgaattcagggtt
tggcatgaaggggataaaagctattatgccatgagaaaaagaaaagaagacggaagaggg
gttatcccgatagaagagtgtaaaattgtagataaagccatatatgatattatgacccca
cttttaaaagagatagaaaaaaacgataatctcaggttcaaactgtatgaaatagacttt
ttaagtaattcaaaaggtgaacttattattacgcttatttatcataaaaaagtggatgaa
agcattgccgaagatattaaaaaactaaaagaaaaattcaaaaacgctgattttattgtt
agaaaaaaaggtagaaaatacgtttttgataaaaactatttaattgaagagcttaatatc
aactcaaaaacttacaaatataaaataattgaaaacacattttcacagcctaaccgtcag
atgaatcaaaaaatgatagaatgggctatgagaaattcagaggacttaaaaggcgatttg
gttgaactttactgtggtaacggaaactttaccatacctttaagtgagaggtttaataaa
gtaattgcaaccgaaatcagtaaagagtcaatcgaggcggcaacgtataacgcggaaata
aacgcaagagataacattacgtttcttgctatgagcgcggctgaattttctaaactgtat
aaagacagatccccgcttattacgaaatacgatttgaaaaatatacttattgacccgcca
agagcgggacttgatgataaaagccgtgagtttgtaaatgaatttgataatattatatat
atttcatgcaatcctgaaacgttacaaagggatttaaaaactttggcaaaaggaagagag
attaaagcatttgcattttttgaccagtttccttataccaatcatgctgaatgcggtgtt
atactgaaaaaaaattag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (12)   
   Pfam (12)   
All databases (38)   

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