KEGG   Nitrospirillum amazonense: Y958_07900
Entry
Y958_07900        CDS       T04935                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nao  Nitrospirillum amazonense
Pathway
nao00010  Glycolysis / Gluconeogenesis
nao00020  Citrate cycle (TCA cycle)
nao00260  Glycine, serine and threonine metabolism
nao00280  Valine, leucine and isoleucine degradation
nao00310  Lysine degradation
nao00380  Tryptophan metabolism
nao00620  Pyruvate metabolism
nao00630  Glyoxylate and dicarboxylate metabolism
nao00640  Propanoate metabolism
nao00785  Lipoic acid metabolism
nao01100  Metabolic pathways
nao01110  Biosynthesis of secondary metabolites
nao01120  Microbial metabolism in diverse environments
nao01200  Carbon metabolism
nao01210  2-Oxocarboxylic acid metabolism
nao01240  Biosynthesis of cofactors
Module
nao_M00009  Citrate cycle (TCA cycle, Krebs cycle)
nao_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nao_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
nao_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nao_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nao00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Y958_07900 (lpdA)
   00020 Citrate cycle (TCA cycle)
    Y958_07900 (lpdA)
   00620 Pyruvate metabolism
    Y958_07900 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    Y958_07900 (lpdA)
   00640 Propanoate metabolism
    Y958_07900 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Y958_07900 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    Y958_07900 (lpdA)
   00310 Lysine degradation
    Y958_07900 (lpdA)
   00380 Tryptophan metabolism
    Y958_07900 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Y958_07900 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nao04147]
    Y958_07900 (lpdA)
Enzymes [BR:nao01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Y958_07900 (lpdA)
Exosome [BR:nao04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Y958_07900 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 DAO NAD_binding_8 FAD_binding_2 FAD_oxidored GIDA AlaDh_PNT_C FAD_binding_3 HI0933_like 2-Hacid_dh_C Thi4 Lys_Orn_oxgnase 3HCDH_N Pilin NAD_binding_7
Other DBs
NCBI-ProteinID: ASG20738
UniProt: A0A248JRN0
Position
1:complement(1713221..1714621)
AA seq 466 aa
MADTEFDVLVLGAGPGGYVAAIRAAQLGLKAAVVEREHLGGICLNWGCIPTKALLRSAEI
YGYMKHADAYGLTVSGVGFDLPKVVKRSRQVANQLSAGVKGLLKKNKVPVFDGTAKLAGG
GKVTVTAKDGASQTLAAKHIIIATGARARSLPGLEPDGKFVWSYKEALVPDTMPKSLLVV
GSGAIGIEFASFFRTLGAEVTVVEVMDRVLPVEDEEISAFARKQFEKQGMKIITGGKVTK
LDKGATTVTAHVEVGGKVETLTVERVITAVGIQANTENIGLENTKVKLDRGHIVTDGYLR
TGEPGVYAIGDVAGAPWLAHKASHEGVICVEKIAGVKDVHPMDKLNIPGCTYCNPQVASV
GLTEAKAKAAGYEIKVGRFPFIGNGKAIALGEAEGLVKTVFDAKTGELLGAHMVGAEVTE
LIQGYVVGKTLETTEAELMHTIFAHPTLSEMMHESVLAAYGRAIHY
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggccgataccgaattcgacgtgctggtcctgggcgccggccccggcggttatgtcgcc
gccatccgcgccgcccagctgggcctgaaggccgcggtggtggaacgtgaacatctgggc
ggcatctgcctgaactggggctgcattccgaccaaggccctgctgcgctccgccgagatc
tacggctacatgaagcacgccgacgcctacggcctgaccgtcagcggcgtgggcttcgac
ctgcccaaggtggtgaagcgctcccgccaggtggcgaaccagctgtcggccggcgtcaag
ggcctgctgaagaagaacaaggtgccggtgttcgacggcacggccaagctggccggcggc
ggcaaggtcaccgtgaccgccaaggacggtgccagccagaccctggcggccaagcacatc
atcatcgcgacgggcgcccgcgcccgctccctgccgggcctggagcctgacggcaagttc
gtctggtcgtacaaggaggccctggtccccgacaccatgccgaagtcgctgctggtcgtg
ggatccggcgccatcggcatcgaattcgccagcttcttccgcaccctgggtgccgaggtg
acggtggtggaggtcatggaccgcgtcctgccggtggaggatgaggaaatctccgccttc
gcccgcaagcagtttgaaaagcagggcatgaagatcatcaccggcggcaaggtgaccaag
ctggacaagggcgccaccacggtgacggcccatgtcgaggtgggcggcaaggtagagacc
ctgacggtggagcgtgtcatcaccgccgtcggcatccaggccaacaccgagaacatcggc
ctggagaacaccaaggtgaagctggaccgcggccacatcgtgaccgacggctacctgcgc
acgggcgagccgggcgtctacgccatcggcgacgtggccggcgccccctggctggcgcac
aaggccagccatgaaggcgtgatctgcgtggagaagatcgccggcgtgaaggacgttcac
ccgatggacaagctgaacatcccgggttgcacctactgcaatccgcaggtggccagcgtt
ggcctgaccgaagccaaggccaaggccgctggctatgagatcaaggtcggccgcttcccc
ttcatcggcaacggcaaggccatcgccctgggcgaggccgagggcctggtgaagacggtg
ttcgacgccaagaccggcgagctgctgggcgcccacatggtgggggccgaggtgacggag
ctgatccagggctacgtcgtcggcaagaccttggagaccaccgaggccgagctgatgcac
accatcttcgcccacccgaccttgtcggaaatgatgcatgagtcggtgctggccgcctac
ggccgcgcgattcattattga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (70)   
   KEGG ORTHOLOGY (1)   
   RefGene (67)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (154)   

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