KEGG   Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112414056
Entry
112414056         CDS       T08872                                 
Symbol
PHF1
Name
(RefSeq) PHD finger protein 1 isoform X1
  KO
K11467  PHD finger protein 1
Organism
nasi  Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:nasi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    112414056 (PHF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nasi03000]
    112414056 (PHF1)
   03036 Chromosome and associated proteins [BR:nasi03036]
    112414056 (PHF1)
Transcription factors [BR:nasi03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    112414056 (PHF1)
Chromosome and associated proteins [BR:nasi03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     112414056 (PHF1)
SSDB
Motif
Pfam: Tudor_2 PHD Mtf2_C ASH2L-like_WH PHD_2 Chromo DUF4537
Other DBs
NCBI-GeneID: 112414056
NCBI-ProteinID: XP_024622115
UniProt: A0A341D5V6
Position
Unknown
AA seq 567 aa
MAQPPRLSRSGAPPLWDPASPAPTSGSRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREV
CLVQFEDDSQFLVLWKDISPAALPGEELLCCVCRSETVVPGNRLVSCEKCRHAYHQDCHV
PRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAMLGMKLSLPYGLKGLDWDAGH
LSNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGG
PEKVRRLQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDTPKGE
RSSRLLSALNSHKDRFISGREIKKRKCLFGLHARIPPPVEAPTGDGAPTSFPSGQGPGGG
VSRPLGKRRRPEPEPLRRRQKGKMEELGPPSAVRNQPEPQEQRERARLQRALQASVSPPP
SSPNQSYQGSSGYNFRPTDARCLPSSPIRMFASFHPSASTAGTSGDGEPPDRSPLELHIG
FPTDLPKSAPHSMTASSSSVPASSPGLPRRSAPPSPLCRSLSPGTGGGVRGGVGYLSRGD
PVRVLARRVRPDGSVQYLVEWGGGGIF
NT seq 1704 nt   +upstreamnt  +downstreamnt
atggcacagcccccccggctgagccgctctggtgcccccccactttgggacccagcttcc
cctgctcccacctcaggctccaggcctcgactttgggagggtcaagatgtgctggccaga
tggacagatgggctgctatacttggggaccatcaaaaaggtggacagtgctcgggaggtg
tgtctggtccagtttgaggatgattcccagtttctggttctatggaaagacatcagccct
gctgccctccctggggaggaactcctctgctgtgtatgtcgctctgagactgtggtccct
gggaaccggctggtcagctgtgagaagtgtcgccatgcttatcaccaggactgccacgtt
ccaagggccccagcccccggagagggagagggcacatcctgggtctgccgccagtgcgtc
tttgccatcgctaccaagaggggaggtgcgctgaagaagggcccctatgcccgggccatg
ctgggcatgaagctgtccctgccgtacggactaaaggggttggactgggacgccgggcat
ctgagcaaccggcagcagagctactgttactgtggtggccctggggagtggaacctgaag
atgctgcagtgcaggagctgcctacagtggttccatgaggcctgcacccagtgtctgagc
aagcccctcctctacggggacaggttctatgagtttgaatgctgtgtgtgtcgggggggc
cctgagaaggtccggaggctacagcttcgctgggtggacgtggctcatcttgtcctctac
cacctcagcgtttgctgtaagaaaaaatactttgattttgaccgtgagatcctccccttc
acctctgagaattgggacagtttgctccttggggagctctcagacacccccaagggagaa
cgttcttccaggctcctctctgctctcaatagccacaaggaccgtttcatttcagggagg
gagattaagaagagaaaatgcttgtttggtctccatgctcggatccctccccctgtggag
gcccctactggagatggagcccccaccagcttcccttcagggcagggccctgggggaggg
gtctcacgtcccctggggaagcgccggaggccggagccagagcccctgaggaggaggcag
aaggggaaaatggaggagctggggccaccctcagcagtgcgcaaccagcccgagccccag
gagcagagggagcgggctcgtctgcagagggcactgcaggcctcagtgtctccaccaccc
tccagccctaaccagagttaccagggcagcagcggctacaacttccggcccacagatgcc
cgctgcctgcccagcagtcccatccggatgttcgcttccttccacccctctgccagcacc
gcagggacctctggggatggtgaacccccagacaggtcacccctggaacttcacattggt
ttccccacagacctccctaaaagtgccccccactcgatgactgcctcatcttcctcagtc
ccagcctcctccccaggtcttcctagacgctcagcacccccttctcccctgtgccgtagt
ttgtctcctggaactgggggaggagtccgaggtggggtcggctacctgtcccgaggggac
cccgtccgggtccttgctcggagagtacggcctgatggctctgtgcagtacctggttgag
tggggaggagggggcatcttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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