KEGG T02270: O3I

Nocardia brasiliensis: O3I_003805

Entry

O3I_003805 CDS T02270

Definition

ATP-dependent DNA ligase (EC:6.5.1.1)

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

nbr Nocardia brasiliensis

Pathway

nbr03410	Base excision repair
nbr03420	Nucleotide excision repair
nbr03430	Mismatch repair
nbr03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:nbr03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:nbr03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:nbr03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:nbr03450]

SSDB

Motif

Pfam:

LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S mRNA_cap_enzyme

Other DBs

NCBI-GI:

407641939

NCBI-GeneID:

13733838

UniProt:

K0EP06

Position

840672..842987

AA seq 771 aa
MAARRNFGGIEVELSNLDKVLYPATGTTKGEVIAYYSAIAPAMLPHIAGRAVTRKRWPNG
VDEPSFFEKNLPSHAPSWIERRTVRHSDRTVTYPLIESEAGMAWLGQQAALEVHVPQWRF
DDDERGPATRLVFDLDPGPGAGLAECAKVALAVRDMVEGIGLRAFPVTSGSKGIHLYVPL
DRELRGSGASTVAKQVASNLEKLHPDLVTATMSKSVRGGKVFLDWSQNNPSKTTIAPYSL
RGREQPNAAAPRSWRELESRKKLRHLRFDEVLARWQSDGDLLAELDPALPQRNTASAESG
PDALAKYRSMRDPARTPEPVPADRPVPGEDSRFVVQEHHARRLHWDVRLERGGVLVCWAV
PKGPPTSSKQNRLAVHTEDHPLEYLDFHGTIPKGQYGGGEMTIWDSGTYVTEKWRDDEVI
VRFHGERLNGRYALIQTNGNQWLMHLMREQHGDAAEPEPNGADTASTGRIIRVSSGPAPF
PRGLAPMLATPGDVADLHTDEWCFETKWDGFRLIAEISSGTMTLRSRKGNVVTARYPGIG
PLADELAGHEVVLDGEAVVFDDHGVANLGLLQADAARAVFVAFDVLYLDGTSLVRKRYSD
RRRVLEALAGTAPSLRVPPRLDGEGADAVRYSQDHGMEGVIAKRRDSVYLPGKRGHSWVK
QRNWRTQDVVVGGWRRSEAREFKSLLVGIPYEGRLIYVGRVGTGFNDADMQGLAGRLAKL
ERKTNPFDNDLTAEERKEAVWVTPKLRGSVRFMNWTETGRLWHPAWLGAQD

NT seq 2316 nt +upstreamnt +downstreamnt
atggccgcccgccggaacttcgggggtatcgaggttgagctgagcaacctcgacaaagtg
ctgtatccagccaccggcaccaccaaaggtgaagtcatcgcctactattcggcgatcgcg
cccgccatgctgccgcatatcgccggtcgagcggtcaccaggaagcgctggcccaacggc
gtcgacgaaccctccttcttcgagaagaaccttccgtcgcacgcgccgtcctggatcgag
cgacgcaccgtccggcactccgatcgcacggtcacctacccgctgatcgaatccgaggcg
gggatggcctggctcggccagcaggcggccctggaagttcatgtgccgcaatggcgtttc
gacgatgacgagcgagggccggccacccggctggtgttcgacctggatcccgggcccggc
gccgggctggccgaatgcgcgaaggtcgcgctggcggtacgcgatatggtcgagggcatc
ggcctgcgcgcgttcccggtgaccagcggtagcaagggaattcatctctatgtcccgctg
gatcgggagttgcgcggcagcggcgcgtcgacggtggccaagcaggtcgcgagcaatctg
gagaagctgcatcccgatctggtgacggccaccatgtcgaaatccgtccgcggcggcaag
gtattcctcgactggagccagaacaacccgtccaagaccaccatcgcgccctattcgctg
cgcgggcgggagcagccgaatgcggcggcgccccgtagctggcgggaattggagagccgg
aaaaagctgcggcacctgcgtttcgacgaagtcctcgcgcgctggcagtccgacggcgac
ctgctcgccgagctggatccggcgctgccgcagcgtaataccgcctcggcggagtcgggc
cccgacgccttggcgaagtaccggtcgatgcgtgatccggcgcgcactcccgagcccgtg
ccggccgaccggccggtgccgggggaggacagtcgcttcgtcgtgcaggagcaccatgcc
cggcggctgcattgggacgtgcggctggagcggggcggcgtgctggtgtgctgggccgtg
ccgaagggaccgcccacctcctcgaagcagaaccgcctcgccgtgcacaccgaggaccac
ccgctggagtacctggatttccacggcacgatcccgaaggggcagtacggcgggggcgag
atgacgatctgggactccggcacctacgtcaccgagaaatggcgggacgacgaggtgatc
gtccgattccacggcgaacgcctcaacgggcgctatgcgctgatccagaccaacggcaat
cagtggctgatgcacctgatgcgggaacagcacggcgacgcggccgagcccgagccgaac
ggtgcggacacggcctcgaccgggcggatcatcagggtgtccagcggtccggcgccgttc
ccgcggggactggcgccgatgctcgcgacccccggcgacgtcgcggatctgcacaccgac
gagtggtgcttcgagacgaagtgggacggcttccggctgatcgcggagatcagctccggc
acaatgactttgcgtagccgcaaaggcaacgtggtgaccgcgcggtacccggggatcggg
ccgctggccgacgaactggccgggcacgaggtggtgctcgacggtgaggcggtggtgttc
gacgatcacggtgtcgccaatctcggcctgttgcaagcggatgcggcgcgggccgtgttc
gtggccttcgacgtgctgtacctggacggcacttcgcttgtccggaaacggtattcggac
cggcgccgggtgctggaggcgctcgccggtaccgcgccgtcgctgcgggtgccgccgcga
ctggacggcgagggcgccgacgcggtgcgctacagccaggaccacggtatggaaggcgtg
atcgccaaacgcagggattcggtctatctgccgggtaagcgcgggcactcctgggtgaag
caacgcaactggcgaacccaggacgtggtggtcggcggctggcggcgcagcgaagcgcgc
gagttcaagtcgctgctcgtcggcattccgtacgagggcaggctgatctacgtcggccgg
gtcggcaccggcttcaacgatgccgacatgcaggggctggcgggacggttggcgaagctc
gaacgcaagacgaacccgttcgacaacgacctgaccgccgaggaacgcaaggaagcggtg
tgggtgacaccgaaactgcgcggctcggtgcggttcatgaactggaccgagaccggccgg
ctgtggcacccggcctggctcggcgcgcaggactga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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