KEGG   Nocardioides sp. JS614: Noca_3982
Entry
Noca_3982         CDS       T00443                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
nca  Nocardioides sp. JS614
Pathway
nca03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nca00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Noca_3982
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nca03019]
    Noca_3982
   03110 Chaperones and folding catalysts [BR:nca03110]
    Noca_3982
   03029 Mitochondrial biogenesis [BR:nca03029]
    Noca_3982
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nca04147]
    Noca_3982
Enzymes [BR:nca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Noca_3982
Messenger RNA biogenesis [BR:nca03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Noca_3982
Chaperones and folding catalysts [BR:nca03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Noca_3982
Mitochondrial biogenesis [BR:nca03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Noca_3982
Exosome [BR:nca04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Noca_3982
  Exosomal proteins of other body fluids (saliva and urine)
   Noca_3982
  Exosomal proteins of breast cancer cells
   Noca_3982
  Exosomal proteins of colorectal cancer cells
   Noca_3982
  Exosomal proteins of bladder cancer cells
   Noca_3982
SSDB
Motif
Pfam: Cpn60_TCP1 DUF5021
Other DBs
NCBI-ProteinID: ABL83479
UniProt: A1SNU4
Position
complement(4200741..4202366)
AA seq 541 aa
MPKLIAFNEEARRGLERGMNTLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQAMVREGLRNVAAGANPMGLKRGIE
AAVEAVSGQLLSMAKDVETKEQIASTASISAADTTVGEIIAEAMDKVGKEGVITVEESNT
FGLDLELTEGMRFDKGYISAYFVTDPERMETVLEDPYVLIANQKISSVKDLLPLLEKVMQ
SGKPLLILAEDVDGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDIAILTGGQVIS
EEVGLKLESTGIELLGQARKVVITKDETTIVEGAGDADQIAGRVNQIRAEIEKSDSDYDR
EKLQERLAKLAGGVAVIKVGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALVQA
ANAAFDKLDLTGDEAVGAQIVRFATDAPLKQIAINAGLEGGVVAEKVRGLTAGHGLNAAT
GEYVDMIASGIIDPAKVTRSALQNAASIAALFLTTEAVVADKPEKAAPMGDPSGGMGGMD
F
NT seq 1626 nt   +upstreamnt  +downstreamnt
atgccgaagctgattgctttcaacgaggaggcccggcgcggtctcgagcgtggcatgaac
acgctcgcggacgctgtcaaggtcacgctcgggcccaagggtcgcaacgtcgtcctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtgtccatcgccaaggagatcgag
ctcgaggacccctacgagaagatcggtgccgagctcgtcaaggaggtcgccaagaagacc
gacgacgtcgccggcgacggcaccaccaccgccaccgtcctcgcccaggcgatggtccgc
gagggcctgcgcaacgtggccgccggtgcgaacccgatgggcctcaagcgcggcatcgag
gcggccgtcgaggccgtgtccggccagctgctgagcatggccaaggacgtcgagaccaag
gagcagatcgcgtccaccgcgagcatctccgcggccgacacgaccgtcggcgagatcatc
gccgaggcgatggacaaggtcggcaaggaaggcgtcatcaccgtcgaggagtcgaacacc
ttcgggctcgacctcgaactcaccgagggcatgcgcttcgacaagggctacatctcggcg
tacttcgtcaccgaccccgagcggatggagacggtcctcgaggacccctacgtcctgatc
gcgaaccagaagatctcctcggtcaaggacctgctgccgctgctcgagaaggtcatgcag
tccggcaagccgctgctgatcctggccgaggacgtcgacggcgaggccctgtccacgctg
gtcgtcaacaagatccgcggcaccttcaagtccgtcgccgtcaaggccccgggcttcggt
gaccgccgcaaggccatgctgcaggacatcgcgatcctcaccggcggccaggtcatctcc
gaggaggtcggcctcaagctcgagtcgaccggcatcgagctgctcggccaggcccgcaag
gtcgtcatcaccaaggacgagaccacgatcgtcgagggtgccggcgacgccgaccagatc
gccggccgggtcaaccagatccgcgccgagatcgagaagtcggactccgactacgaccgc
gagaagctccaggagcgcctcgccaagctggccggcggcgtggccgtcatcaaggtcggc
gcggccaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgttcgcaac
gcgaaggcggccgtcgaggagggcatcgtcgccggtggtggcgtggcgctcgtccaggct
gccaacgccgcgttcgacaagctcgacctcaccggtgacgaggccgtgggtgcgcagatc
gtgcgcttcgcgaccgatgccccgctcaagcagatcgcgatcaacgccggcctcgagggc
ggcgtcgtggcggagaaggtgcgcggcctcacggccggtcacggcctcaatgcggccacc
ggcgagtacgtcgacatgatcgcctcgggcatcatcgaccccgccaaggtgacccgcagc
gcgctgcagaacgccgcctccatcgcggcgctcttcctcaccaccgaggccgtcgtggcc
gacaagccggagaaggccgccccgatgggcgacccgtccggcggcatgggcggcatggac
ttctga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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