KEGG   Niveispirillum cyanobacteriorum: C0V82_04025
Entry
C0V82_04025       CDS       T05262                                 
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
ncb  Niveispirillum cyanobacteriorum
Pathway
ncb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ncb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    C0V82_04025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ncb03400]
    C0V82_04025
DNA repair and recombination proteins [BR:ncb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C0V82_04025
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      C0V82_04025
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_30 UB2H AAA_22 P-loop_SecA Peripla_BP_6 Kinesin SWI2_SNF2 AAA_7 Microtub_bd DUF87
Other DBs
NCBI-ProteinID: AUN31655
UniProt: A0A2K9NHA1
Position
eg_1:911171..913363
AA seq 730 aa
MPWRIKVEERPFIEPLTVVSEYTPAGDQPRAIAELTEGLVRGEKDQVLLGVTGSGKTFTM
AHVIQKVQRPTLILAPNKTLAAQLYGEMKSFFPNNAVEYFVSYYDYYQPEAYVPRTDTYI
EKESSINEQIDRMRHAATRALLERQDCIIVASVSCIYGIGSVETYSEMTIPLQVGQMLHR
QGFLQRLVELQYRRNDAGFGRGSFRVRGDTIELFPAHLEDRAWRLSLFGDELEAINEIDP
LTGEKLASMKEVRIYANSHYVTPKPTLFQAVEQIKRDLKLRLDELVPQGKLLEAQRLEQR
TTFDIEMMVATGSCAGIENYSRYLSGRNPGEPPPTLFEYLPEDALLIVDESHVMVPQVGG
MYRGDFMRKSTLADYGFRLPSCADNRPLKFEEWDAMRPQTVFVSATPGDWELERTGGVFT
EQVVRPTGLVDPQVIIRPTDTQVDDVMAEVREVTAKGLRVLVTTLTKKMAEALTEYMMEA
GIKVRYIHSDVETLERIEIIRDLRLGVFDVLIGINLLREGLDIPECGLVAILDADKEGYL
RSRTSLIQTIGRAARNVEGRAILYADRETNSMKAALEETARRRAKQLEYNAAHGITPESV
KKNISDILGSVYERGDRVEVDTGAAEGIGLAGKDIKTIIAELEKKMRAAAADLEFEEAGR
IRDEIRRLEAIDLGLAPGASPIRASAQGEKPRSNAKPERGGRTKGAAKTKDGGLNVGGIE
FGGKNTKKRR
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgccctggcgcatcaaggtggaggagaggcccttcatcgaaccgctgactgtcgtgtcg
gaatacacaccggcgggcgatcagccgcgcgcgattgccgaactgaccgagggtctggtg
cggggggagaaggatcaggttctgctgggcgtcaccggctcgggcaagaccttcaccatg
gcccatgtgatccagaaggtgcagcgcccgaccctgatcctggcaccgaacaagacgctg
gcggcgcagctctatggagagatgaaaagtttctttccaaacaacgccgtagagtatttt
gtttcctattacgattattatcagcccgaggcctatgtgccccggaccgacacctatatc
gagaaggaaagctcgattaacgaacagatcgatcgcatgcgccacgccgccacccgcgcc
ctgctggagcggcaagactgcatcatcgtggcctcggtctcctgcatctacggtatcggc
tctgtcgaaacctattcggaaatgacgatccccctgcaggtcgggcagatgctgcaccgg
cagggttttcttcagagattggttgagcttcagtaccgccgcaacgatgccggctttggc
cgtggctccttccgcgtgcgtggcgacacgatcgaactgttccccgcccacctggaggat
cgtgcctggcgtttgtccctgttcggggatgagttggaggcgattaatgagatcgatccc
ctgaccggcgaaaagctggcctccatgaaggaggtgcgcatctacgccaacagccactat
gtcacgccgaagccgaccctgttccaggccgtggagcagatcaagcgtgacttgaagctg
cggctggatgagcttgttccacaaggaaaattgctggaagcacagcgcctggaacagcgc
accaccttcgatatcgaaatgatggtggccaccggctcctgtgcgggtatcgaaaactat
tcccgctatctctcgggccgcaatccgggcgaaccgccgcccaccctgttcgaatatctg
cccgaggatgcgctgctgatcgtcgatgaaagccacgtgatggtgccacaggtgggcggc
atgtaccggggcgacttcatgcgtaaatcgaccctggctgattatggattccgccttcca
tcctgcgccgataaccgcccgctgaagtttgaggaatgggacgccatgcgtccgcagacc
gtctttgtctccgccacgccgggtgattgggaactggagcgaacgggcggcgtcttcacc
gaacaggtggtgcgccccacgggtctggtcgatccgcaggtcatcatccgccccaccgac
acccaggtcgatgacgtgatggcggaggtgcgggaggtgacggccaagggcctgcgcgtc
ctggtcaccaccctgaccaagaagatggcggaggcgctgacggagtacatgatggaggcg
gggatcaaggtccgctacattcactccgacgtcgaaacccttgaacgcattgagattatc
cgcgatctgcgtttgggcgtgttcgatgtgctgatcggcatcaacctgctgcgcgaaggg
ttggacatccccgaatgcggcctcgtcgccatcctggacgctgacaaggaaggctatctg
cgcagccgcaccagcctgatccagaccatcggccgtgcggcccgtaacgttgaaggccgc
gccatcctctatgccgaccgcgaaaccaactccatgaaggcagcactggaggaaacggcg
cggcgccgtgccaagcagttggaatataacgccgcccacggcatcaccccggaatcggtg
aagaagaatatctccgacatcctgggcagtgtctatgagcgcggcgaccgggtggaggtg
gatacgggggcagccgaaggcatcggtctggccggcaaggacatcaagaccatcatcgcc
gagctggaaaagaagatgcgtgccgccgccgcggatctggaattcgaggaggcgggtcgc
atccgcgacgaaatccgccgcctggaagccatcgacctgggcctggcccccggcgccagc
cccatccgtgcgtcagctcaaggggaaaagccgcgcagcaatgccaagccggaaaggggc
ggtcgcaccaagggggccgccaagaccaaggatggcggcctaaatgtcggcggtatcgag
tttgggggcaagaacaccaagaagcggcgttaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (60)   

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