KEGG   Notothenia coriiceps (black rockcod): 104944396
Entry
104944396         CDS       T04920                                 
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
  KO
K08285  midline 1 [EC:2.3.2.27]
Organism
ncc  Notothenia coriiceps (black rockcod)
Pathway
ncc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104944396 (mid1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncc04121]
    104944396 (mid1)
Enzymes [BR:ncc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     104944396 (mid1)
Ubiquitin system [BR:ncc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    104944396 (mid1)
SSDB
Motif
Pfam: COS SPRY zf-B_box fn3 zf-RING_UBOX zf-C3HC4_4 PRY zf-C3HC4 zf-C3HC4_3 Pur_ac_phosph_N zf-RING_2 zf-RING_5 zf-C3HC4_2 NDNF
Other DBs
NCBI-GeneID: 104944396
NCBI-ProteinID: XP_010768224
UniProt: A0A6I9MPN6
Position
Unknown
AA seq 689 aa
MDTLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILISHCATNESVLSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGIPLPLALPAPHSGPNSPGDEGRDRL
ALVPFSAAMSSPGTPPEPIQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTG
HRLIEPMPDSHLRGLQCLEHEEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEK
LKQALDSNLSNLIKRNNELESIMGKLIQTCQHVEVNASRQEGKLLEECDVLIEIIQQRRQ
IIGSKIKEGKTQRIRKLAQQISNCKQCIERSSALITQADQTLKETDHARFLQTAKCINER
VSMASASTQVLIPEIHLTDNFDTVALDFTREKKLLESLDYLTAPNAPCIREELCTASYDT
ISVHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTK
YIFVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHN
QERFTSQNSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNPASWVLC
RCNNSWVVRHNSKELAIEPSPHLRRVGILLDYDVGTVSFYDAVGSQHLHTFHVSFVQPVC
PVFNVWNKCLTILSGLPIPDHLEGLELDN
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggacacactggagtcagagctgacttgcccaatctgcctggagctctttgaagaccca
ctgctgctgccctgcgctcacagcctgtgtttcggctgcgcccatcgcatcctcatctct
cactgtgccaccaacgaatcagttctgagcatcggcgccttccagtgccccacctgtaga
tatgtcatctccttgagtcctgaacgtggactagaaggactaaagagaaacgtgacgttg
cagaacattattgatagagtacagagggcctcatcctcggctgggatccctcttccgctg
gcgttgcctgcgccccacagcgggcccaactctcccggagacgaagggagagaccggtta
gcgttggtcccgttcagtgccgccatgtccagcccgggcacgcctcccgagcccatccag
tgccagttctgtgagcaggacccgccacaggatgccgtgaaaacgtgtgtgacgtgcgag
gtgtcgtactgcgaggagtgcctcagagcaacgcacccgaacaagaagccgttcaccggc
caccggctcatcgagcccatgccagactcccacctcagggggctgcagtgcctggagcac
gaggaggagaaggtgaacatgtactgtgtcacggacgatcagctgatatgctcgctgtgc
aaactggtggggaggcaccgagaccaccaggtggcagcgctgagcgaccgatatgaaaaa
ctcaagcaagccctggactccaacctgagcaatttgatcaagaggaacaatgagctggag
tctatcatggggaaactgatccagacttgtcaacatgtagaggtgaacgcgtcccgtcag
gagggcaagctcctggaggagtgtgatgtcctgatcgaaattatccagcagaggaggcag
atcatcgggagcaagatcaaggaggggaagacacaaaggattcggaagctcgcccaacag
atctccaactgcaagcagtgcatcgagaggtcctcggccctcatcacgcaggccgatcag
acgctgaaagaaactgaccacgctcgcttcctgcagaccgccaagtgcatcaacgagagg
gtttccatggcatcagcttcaactcaagtgctgatccctgagatacacctaacggacaac
ttcgacacggtcgccctggacttcaccagagagaagaagctgctggaaagtctggattac
cttactgctccgaatgctccgtgcatacgggaagagttgtgcacggcgtcctacgacacc
atctctgtccactggacgtctgatgatgagttcacggtggtatcctatgagctgcagtat
gctatctttactggacagtctaacattgccagtctgtgtaactctttggagagctggatg
attgttcccaacatcaagcagaaccactacacggtgcacggtctgcagagcggcaccaag
tatatcttcgttgtcaaggctattaaccaagcaggaagcaggagcagcgagccggggact
ctgaagaccaacagccagcccttcaagctggaccccaaatcggcccacaagaagctgaag
gtgtcccacgacaacctgacggtggagcgcgacgaaaccacgtccaagaaaggccacaac
caggagcgcttcaccagccagaacagctacggcgtggtggggaacgtctacatcgacagc
ggccgccactactgggaggctttgatcggagggagcacatggtacgctgtgggtattgcc
tacaaatcagctccgaagcacgagtggatcggcaagaacccggcctcctgggtgctctgc
cgctgcaacaactcctgggtggttcgccacaacagcaaggagctggccatcgagccctcg
ccccacctgcggcgcgtcgggatcctgttggactacgacgtcggcaccgtgagcttctac
gacgccgtgggctcccagcacctgcacaccttccacgtgtccttcgtgcagcccgtgtgc
cccgtgttcaacgtgtggaataagtgtctgacgattctgtccggcctacccatcccggac
cacctcgaggggctggagctcgacaactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (14)   
   Pfam (14)   
All databases (40)   

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