KEGG   Notothenia coriiceps (black rockcod): 104966940
Entry
104966940         CDS       T04920                                 
Symbol
robo1
Name
(RefSeq) roundabout homolog 1 isoform X1
  KO
K06753  roundabout, axon guidance receptor 1
Organism
ncc  Notothenia coriiceps (black rockcod)
Brite
KEGG Orthology (KO) [BR:ncc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ncc04515]
    104966940 (robo1)
Cell adhesion molecules [BR:ncc04515]
 Immunoglobulin superfamily
  ROBO family
   104966940 (robo1)
SSDB
Motif
Pfam: I-set Ig_3 ig Ig_2 fn3 V-set C2-set_2 Pur_ac_phosph_N Ig_5 Ig_C17orf99
Other DBs
NCBI-GeneID: 104966940
NCBI-ProteinID: XP_010794592
UniProt: A0A6I9Q120
Position
Unknown
AA seq 1712 aa
MVTVCLLVVLFSMLVMLGVPIDHKGPHGAHRSAGLSKSQSCKRLPNNFGLHQTLRHSHNK
PHKCNQVFHRSRLRQEDTPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTVEWYKDGERV
ETDRDNPRSQRMLLPSGSLFFLRIVHGRRSKPDEGSYVCVARNYLGEAASHNASLEVAIL
RDDFRQNPADVIVAAGEPAVLECQPPRGHPEPTISWKKDGVNIDDRDERITIRGGKLMIT
NARKSDAGKYVCVGTNMVGERESEIAELTVLERPSFVRRPGSQVMLVDQSVEFRCEARGD
PVPTVRWRKDDGDLPKGRYEIREDHTLKIRRLTSADVGSYTCVVENMVGKAEASASLTVH
VVSVPPAFVVRPRNQVVGVGRTVTFQCEATGNPQPAIFWQREGSQNLLFSYQPPQPSSRF
SVTQSGDLTITEAERSDMGYYSCQAINTAGSVLTKALLEITDVVSDRPPPVIRQGPTNQS
VAVDGTVILNCVATGNPTPTILWRKDGVLVSTHDSRVKQLDTGALQIRYAKLGDTGTYTC
IASTPSGEATWKAYLEVHEFGVPVQPNRPTDPNLIPSAPSKPEITDSTRTSISLSWRPNL
NAGATPTSYIIEAFSHASGSSWQTLAEHVKTESFVLKGLKPSAVYLFLVRAANAYGLSDP
SPITEAVKTQDIPPTSQGVDHRQIQRELGEVLIHLHNPTILSSSSVRVQWTVEQQSQYIQ
GYKVMYRPSPQGLQRSEWAVFEVRTPGEESAVVPQLRKGVTYEFKIRPFFNEFQGTDSDI
KIGKTLEEAPSAPPREVTVTESEDNGTAIVVSWQPPPEEEQNGVVQEYKIWCLGNESKYH
INRTVDGSVLSLLIPSLAPGIRYSVEVAASTGAGPGVKSDITFFQLDASGRMTETGIQEN
PLSQQISDVVKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLSSSYAGIRKVPSFTFT
PTVAYQRGGEGVSSAGRPGLLNIGESATQPWLADTWPNSCSNHNDCSMNCCTAGNGNSDS
NLATYSRPADCIANYNNQMENKQTNLMVPESGVYGDVDLSNKINEMKTFNSPNLKDGRFV
GPGGQPTPYATTQLIQSSIMGNHGNPDRGTGGLLGGGEMNEKHCWKPPSHQQQKQEMGSQ
MQYNIMEQNKLNKDRYRGGDSPMPATIPYNQTHDSHTGGSYNSSDRGSSSTSGSQGQKKG
VRTPKLPKQSTMNWADLLPPPPANPPPSRSTEEYSLSMDESCEPDMQCPMPPSHMYLQPD
ELEEEEEMERGPTPPIRGAASSPAAVSYSHQSTATLTPSPQEEMQPMLQDAPDNHERRRH
TVSPPPLHMPHSPSHTYGYIPSPLVLDTDGMDEDDDILEEEEEEGDETDSEVAKMHYHHT
HPHTHPHHPQMHPRRLLLRGLEQTPASSTGDLESSVTGSMINGWGSASEEDNVSSGRSSA
VSSSDGSFFTDADFAQAVAAAAEYSGVRVAKYPHTLGPEVGGASARKYQINPSGHRPSSP
VSTDSNMSMAAVHRRPPKKQKQHPAAHPAAHPAAHPAAHPAAHPGNQRREVYNEDLPPPP
IPPPAVLKSPTHPSKAVLEGRGVSPKAVEGRDKRGGTGGYQLREGSDTRTSSSERREAQE
RQRTAHGGKGTKHEGSTASKARQHAEDIQPYSRPQFPTVNSPRDPSSSSSMSSRGSGGRR
RGEGGRRNPADMSLNTTGAFQPGDEESEMVES
NT seq 5139 nt   +upstreamnt  +downstreamnt
atggtgactgtctgtttgctggtggtgctgttttccatgctggtcatgctgggagtccct
atagaccacaagggaccacacggagcccatcgcagcgctggcttatcgaagtctcaatcc
tgcaaaaggctgcctaataattttggacttcaccagactttgagacactcccataacaaa
ccacacaaatgtaaccaggtctttcacagatctcgtctacgccaagaggacaccccaccc
cggattgtggaacacccctctgacctgattgtctccaaaggggagcccgccaccctcaac
tgtaaagctgaggggcggcctaccccgacagtggagtggtacaaggatggagagcgggtg
gaaacggacagggacaatccccgttctcagcgcatgctgctgcccagtggctccctcttt
tttctacgcatcgtccacggacgacggagcaagccggatgaaggttcctacgtctgtgtt
gcccgcaactacctgggagaagcagcgagccacaatgcctctctggaagtagccatttta
cgtgatgacttcagacaaaaccctgcagatgtgatcgtggcggcaggagagccggcggtc
ctggagtgtcaacctccccgtggacatcctgaacccaccatatcgtggaaaaaagatgga
gtaaacattgacgaccgagatgagagaatcactatacgcggagggaagctgatgatcaca
aatgcccggaagagcgatgctgggaaatatgtgtgcgttggcacaaacatggtcggagaa
cgtgaaagtgaaatagccgaactcacagtacttgaacgtcccagctttgtccgtcgccca
ggcagccaggtgatgttagtagaccaaagtgtggagttcaggtgtgaggctcgtggcgac
ccagttcccaccgtgcgctggaggaaagacgatggtgacctgcccaaaggaagatatgag
attcgtgaagaccacaccctgaagatccgtcgtctgacttcagccgatgtaggctcctac
acctgcgtggtcgagaacatggtgggcaaggcggaggcatcggcctcgctcaccgtccac
gttgtgtctgtgccaccggcttttgtggttagaccaaggaaccaggtggtgggggttggc
agaaccgtcacctttcagtgcgaagccactggaaacccacagccagccattttctggcag
cgggaaggcagtcagaaccttctgttctcctaccaacctcctcaaccatctagccgattt
tctgtaactcagtctggggacctgaccatcacggaagccgaacgctcagacatggggtac
tacagctgccaggccatcaacactgctggcagcgtcctcaccaaggctctgctagagatc
actgatgttgtgtcagaccgcccgccaccagttatccggcagggcccgaccaatcagtca
gtagctgtggacggcacagtcatcctcaattgtgtggcaacaggaaaccccacccccacc
attctgtggaggaaggatggtgtgttggtgtccacacatgactccagggtcaaacagctg
gacacaggcgcattacagatccgctatgcaaagcttggtgacactggtacctacacctgc
atcgcatctacaccgagtggagaggccacatggaaagcctacttagaggttcatgagttt
ggagttccagttcagccaaacaggcccactgacccaaacctgatccccagtgccccttcc
aaacctgagatcactgattctacccgcacctccatctccctttcctggagacctaacctt
aatgctggagccacacccacctcctatataatagaggccttcagtcatgcatcagggagc
agctggcaaaccttggcagagcatgtgaaaactgagtcatttgtactgaagggcttgaag
cccagtgcagtctacctcttcttagtacgggcagccaatgcctacgggctgagtgatccc
agtcctatcactgaagctgtgaaaacacaagatatccctcccaccagtcagggcgtggac
catcgtcagatccaaagggagttgggagaagtgctcatacaccttcacaacccaaccatt
ctctcctcctcatctgtcagggtgcagtggacagtggagcagcagtcgcagtacatccag
ggctacaaggtgatgtacagaccttcaccgcaggggctacagaggagtgagtgggctgtg
ttcgaggtgcgaactcccggggaggaaagcgctgttgtgccgcagcttcggaaaggagtc
acatacgaattcaaaatccgccccttcttcaatgagttccagggaacagacagtgatatc
aaaattggcaagacgctggaagaagcccccagtgccccgcctcgtgaggttacagtgacg
gagagtgaggacaatgggaccgccatcgtggtctcctggcaaccccctccagaagaggaa
cagaatggggtggtccaggagtacaagatttggtgcttggggaatgagagcaagtaccat
atcaaccgcacagttgacggctcagtcttatccctgctcattccaagtctggccccaggg
atccgctacagcgtggaggtagcagccagcaccggggcgggtcccggggtcaagagcgat
atcaccttcttccagcttgatgcatctgggcgaatgacagagacggggatccaagagaac
cccctgtcccagcagatctccgatgttgtcaagcagccggcctttatagccggcatagga
gctgcgtgctggatcatcctcatggtcttcagcatctggttgtatagacaccgaaagaag
aggaatggcctctccagcagttatgcaggcattcgcaaagttccgtcatttactttcaca
ccaaccgtggcatatcagagaggaggagagggtgttagcagcgctggaaggcctggtttg
ctaaacattggggaatctgctacacaaccatggctggcagacacatggccaaactcctgc
tccaatcacaacgactgcagcatgaactgctgcactgcaggcaatggcaacagcgacagc
aacttggcaacctacagccgcccagccgactgcatcgccaattataacaaccagatggaa
aacaagcagaccaacctcatggtgccagagtcaggcgtctatggagatgtagacttgtcc
aacaagatcaatgagatgaagaccttcaacagcccaaacctgaaagatggccgctttgta
gggcctgggggccagccgacaccatacgccaccacccagctcatccagtcctccatcatg
ggcaaccacggtaaccccgacagaggaaccggaggcctcctgggtggaggggagatgaat
gaaaagcactgctggaagcccccctcacaccagcagcagaaacaggaaatgggctcccag
atgcagtacaacatcatggagcaaaacaagctgaacaaggaccgctacagaggaggtgac
agccctatgcctgccaccatcccctacaaccagacccatgacagtcacactggaggctcc
tacaacagctcggaccgaggcagcagtagcacctccgggagtcagggtcaaaagaaggga
gtgcgcacccccaaactacccaaacagagcacaatgaattgggctgaccttctaccccct
ccccctgcaaacccacccccaagtcggagcacagaggagtactcgctttccatggatgaa
agttgtgaaccagacatgcagtgccccatgcccccctctcacatgtacctgcagcctgat
gagctggaggaggaagaggagatggagaggggccccactcctcccatccgaggagcagcc
tcttcccctgcagctgtatcttacagtcaccagtccacagccaccctcaccccctccccc
caggaagagatgcagccgatgctccaggatgcacctgacaaccatgaacgcaggcgccac
acagtgagccccccaccccttcacatgccccactctccttcacacacatatgggtacatc
cccagcccgttggttttggacactgatggcatggatgaagatgacgatatattggaggaa
gaggaggaggagggtgacgagacagattcagaggtggccaagatgcactaccaccacacc
cacccccacacacacccccaccacccccagatgcatccacgaaggttgctgctccgaggg
cttgaacaaacgcctgcgtccagcaccggcgacctggagagctccgtcaccggctccatg
atcaacggatgggggtcggcttctgaagaggataatgtctcttcagggaggtccagtgcc
gtcagctcatcagacggatccttcttcactgatgctgactttgctcaagcggtggctgca
gctgcagagtactcaggcgtcagggtggccaaatatccacacacactgggcccagaagtc
ggaggagcgtcagcacgaaaataccaaataaacccgtcaggccaccgtcccagcagcccg
gtgtccactgacagtaacatgagcatggcagctgtacacaggaggcctcctaagaagcag
aaacagcatccagcggctcatccagcggctcatccagcagctcatccagcggctcatcca
gcggctcatccaggaaaccagcgacgtgaagtctataatgaagatctccctcctccgccc
atcccacctcctgcagtgctcaagtcacctacacacccgtccaaggcagtcttggagggc
cggggagtttcccccaaagcagttgaaggtcgagacaagagaggaggaaccgggggctac
cagcttagagagggttcggacaccagaaccagctcctctgagcgcagagaggctcaggag
agacaaaggactgctcatggagggaaagggactaaacatgagggtagcaccgccagcaag
gctcgccaacatgcagaggacattcagccctatagccgaccacagttccccacagtcaac
agcccccgggaccccagctcctccagctccatgtcttccaggggctcgggggggcggcgg
agaggagaagggggccgcaggaaccctgcagacatgagcctcaacaccacgggggccttc
caaccaggagatgaagagtctgagatggtagaaagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (54)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (10)   
   Pfam (10)   
All databases (80)   

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