KEGG   Nostocales cyanobacterium HT-58-2: BZZ01_20940
Entry
BZZ01_20940       CDS       T04905                                 
Name
(GenBank) recombinase RecQ
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
ncn  Nostocales cyanobacterium HT-58-2
Pathway
ncn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ncn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BZZ01_20940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncn03019]
    BZZ01_20940
   03400 DNA repair and recombination proteins [BR:ncn03400]
    BZZ01_20940
Enzymes [BR:ncn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BZZ01_20940
Messenger RNA biogenesis [BR:ncn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     BZZ01_20940
DNA repair and recombination proteins [BR:ncn03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BZZ01_20940
SSDB
Motif
Pfam: Helicase_C DEAD RecQ_Zn_bind ResIII
Other DBs
NCBI-ProteinID: ARV60758
UniProt: A0A1Y0RPM4
Position
complement(5121551..5122996)
AA seq 481 aa
MNQSATTNWNEARAAFQKIWGYEDFRPPQGEIIQSLLAKEDTLIIMPTGGGKSICFQLPA
LLQTGLTLVVSPLVALMENQVQELRERRLPAALLHSELPPDKRRMTLQALERQQLRLLYL
SPETLLSKPVWERLCQPQLVINGIILDEAHCLVQWGDTFRPAYRRLGTVRPALLKSKPLG
TNIALAAFTATADPLAQTKIREVLQLQQPAVFCIYPYRSNINPYIRVAWTPTGRKQQLLK
FLYEKSQQTGLVYVRTRRDSEELTTWLQEKGYVTAAYHAGLGAEERRAIEAQWLSGKMAF
VICTCAFGMGINKSDVRWVVHFHPPLLISEYVQEIGRAGRDGKPAEALTLISEPTGWLDP
EDKQRQRFFEENLQQLQLSAQQVLKKLPKTGEVKTVAREFPNGAIALSLLHSSGQLQWLD
PFHYKIIPGAKTQSVSQSHVAKQMNQYLTTRQCRWRFLLSAFGFEEQVNNWRCGHCDNCC
K
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgaatcaatctgcaacaaccaattggaatgaagcccgggctgcatttcaaaaaatctgg
ggttatgaagatttccgtccaccgcagggagaaattatccagagtttgttggcaaaggaa
gatacactcattatcatgccaacaggtgggggaaagtcgatttgctttcaactgccagca
ctactgcaaactggattgacgcttgttgtttcgcctttggtggcgctgatggaaaaccaa
gtgcaggaactccgggaacggcgtttaccagctgcccttttacatagcgaattgccaccc
gacaagcgacgcatgactttacaggcgttggaacggcaacagttaagattactttacctg
tccccagaaacattactgagcaagccagtgtgggagaggttgtgtcagccacaacttgtg
attaatggcatcatactggatgaagcgcattgtttggtacagtggggagacacttttaga
ccagcctatcgaaggttggggacggtgcgaccagcgctgcttaaatcgaaaccactggga
acaaacatagcgctagccgcttttaccgccaccgccgaccctctagcccaaacaaaaatt
cgagaagttcttcaactacagcaaccagctgttttttgcatttatccttatcgctctaat
attaacccttatattcgtgtagcttggactccaacaggcagaaagcaacaattattaaaa
tttctttacgagaagtcacaacaaactgggttagtttatgttcgcacaaggcgagatagt
gaagaactcactacatggctgcaagagaagggttacgttacggcagcttatcatgcgggc
ttgggtgcagaggaacgtcgcgctatagaggcacaatggctgagtggaaaaatggcgttt
gttatctgtacgtgtgcttttggtatgggaataaataagtcagatgtgcggtgggtggtt
cattttcacccgccgttgttgatttcagagtatgttcaggagattggacgcgctggacga
gatggaaaaccagcagaggcgctgacgttgatcagtgaacctacagggtggctagatcca
gaagataagcaaagacaaaggttttttgaggagaatttgcagcagctacaattatctgcg
cagcaagtcttgaaaaaattaccaaaaacaggggaagtgaagactgtggcgcgagaattt
cccaatggtgcgatcgccctttctctgttacatagcagcggacaacttcagtggcttgac
cctttccattacaaaattattccgggggcgaaaactcaatctgtctcacaatcgcacgta
gctaagcagatgaatcagtatcttacgaccaggcagtgtcgctggcgttttttgttaagt
gcctttggttttgaagaacaagtcaataactggcgttgtggtcactgtgataattgttgc
aaatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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