KEGG   Neurospora crassa: NCU08427
Entry
NCU08427          CDS       T01034                                 
Name
(RefSeq) activator 1 subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
ncr  Neurospora crassa
Pathway
ncr03030  DNA replication
ncr03410  Base excision repair
ncr03420  Nucleotide excision repair
ncr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ncr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NCU08427
   03410 Base excision repair
    NCU08427
   03420 Nucleotide excision repair
    NCU08427
   03430 Mismatch repair
    NCU08427
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncr03032]
    NCU08427
   03036 Chromosome and associated proteins [BR:ncr03036]
    NCU08427
   03400 DNA repair and recombination proteins [BR:ncr03400]
    NCU08427
DNA replication proteins [BR:ncr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    NCU08427
  DNA Replication Termination Factors
   ELG1-RFC complex
    NCU08427
Chromosome and associated proteins [BR:ncr03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    NCU08427
DNA repair and recombination proteins [BR:ncr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     NCU08427
  Check point factors
   HRAD17(Rad24)-RFC complex
    NCU08427
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_assoc_2 AAA_22 AAA_30 AAA_11 Rad17 AAA_16 RuvB_N AAA_24 DNA_pol3_delta DUF815 ResIII AAA_3 AAA_14 DEAD AAA_19 AAA_5 PhoH AAA_28 SLFN-g3_helicase AAA_7 Mg_chelatase AAA_18 RNA_helicase CCDC138_C bpMoxR
Other DBs
NCBI-GeneID: 3879557
NCBI-ProteinID: XP_963397
UniProt: Q1K8P6
Position
II:4033287..4035005
AA seq 389 aa
MSDFEDEMDIDVPVSKDVMFAATNTAKGKRSAANLPVEAEDSLPWVEKYRPVSLSDVSGQ
QDILATINKFVDTNRLPHLLFYGPPGTGKTSTVLALARQIYGAANMRQMVLELNASDDRG
IDVVREQIKTFASTKQIFSLGSSSSRSGLAGFKLIILDEADAMTSTAQMALRRIMEKYTA
NTRFCIIANYSHKLSPALLSRCTRFRFSPLKEKDIRVLVDKVIDEENVKILPDATDALVR
LSKGDMRRALNVLQACHASSTPLQPKNAPKIAEKDIVRETITIRTIYDCVAAPPPDAIKK
ILSTLLSTSDVTTCLSTINTLKVAQGLALADIITALSEEIVKLEVKPQVMITWLDELAKI
EHRVASGAGEVIQTGAVVGAIRNGVELMG
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgtcggactttgaagacgaaatggacattgatgtcccagtgtccaaggacgtcatgttc
gctgccaccaacacggccaagggcaagcgaagcgctgccaacctgcctgttgaagcagaa
gacagtctcccatgggtcgagaagtaccgccccgtatccctctccgatgtgtctggccaa
caagacattctcgcaaccatcaacaagtttgtcgacacgaaccgactcccccatctccta
ttctacggtccccccggtaccggaaaaacatcgaccgttctcgccctggcccgacaaatc
tatggcgccgccaacatgcgccagatggtgctcgagttgaacgcttccgatgaccgtggt
atcgacgttgtgcgcgagcaaatcaagacctttgcctccaccaagcagatcttctccctc
ggctcctcctcttcgcgctcggggctggctggtttcaagcttattattctcgacgaggcc
gatgctatgacgtccacagcgcagatggccctccgtcgcatcatggaaaagtacacggcc
aacactcgcttctgcatcattgccaactactcccacaagctcagcccagccctcctgtcg
agatgcacacggttccgtttcagccctctaaaagaaaaagatattcgtgtcttggtggac
aaggtcattgacgaggaaaacgtcaagattctgccagatgctaccgatgcgctggtgcgg
ttgagcaagggtgatatgcgtcgggcactaaacgtgctccaggcttgccacgcgtcaagc
acaccactccaaccaaagaacgcccccaagatcgccgaaaaggacattgtacgggaaacc
atcaccattcgaaccatctacgactgcgttgccgccccaccacccgacgccatcaaaaag
attctcagcacacttttgagcacgagcgacgtcacaacctgtctgtcgactatcaacacc
ctcaaggttgcacaaggtttggcccttgccgacattatcaccgctctgtcggaagagatc
gtcaagctggaagtcaagccgcaggtcatgatcacatggcttgatgaacttgccaagatt
gagcatcgggtagcgagcggagccggagaggtgatccagactggtgcggtagtgggtgcg
atacggaatggtgtagaactgatgggatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (28)   
   Pfam (28)   
All databases (45)   

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