KEGG   Naumovozyma castellii: NCAS_0H00860
Entry
NCAS_0H00860      CDS       T02233                                 
Symbol
NCAS0H00860
Name
(RefSeq) hypothetical protein
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ncs  Naumovozyma castellii
Pathway
ncs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ncs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCAS_0H00860 (NCAS0H00860)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncs03019]
    NCAS_0H00860 (NCAS0H00860)
Messenger RNA biogenesis [BR:ncs03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     NCAS_0H00860 (NCAS0H00860)
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC MC2
Other DBs
NCBI-GeneID: 11528767
NCBI-ProteinID: XP_003677745
UniProt: G0VIR9
Position
8:complement(156180..158447)
AA seq 755 aa
MSEQSQEQEKTLLPKVVNTVRAASALAAQDVDFYRSIDKDIAHSLEQSSNQIADMINSVL
LSIDENSEQVDGTKENLEDIWKDFGNLMDNLFEKSDRSIDIITRGHGGSNGQSGMQYIDE
FSGRDLTPGKQILKPQLKFTTPIDNTESHPFIPLLKEKPFALKPLEESMQMIPEDETSPM
HYPQPYEYEIDHQEYNDLILQKKDPIPSTSWTDNEPIWVDTVSQLQSIMPDLEASTEIAV
DLEHHDYRTYYGITCLMQISTRKNDYLIDTLALREDLQILNNVFANPMITKVFHGAFMDI
IWLQRDLGLYVVGLFDTFHASRAMGLPKHSLAYLLEKFAQFKTSKKYQLADWRIRPLSKA
MHAYARADTHFLLNIFDQMRNSLIEQNKLAGVLKESRNVAKRRFEYSSFRPKVLQTNGLV
YSPIEKDDPWKTIMFQYNIPPQKEPLLKELYQWRDKIARRDDESPRFVMPNQLLVSLVAY
TPIDAPGVVSVSNSVTDYVRSNSKILANLIKNCLAKMKDNKFLDNNVAEEGISVVPETGH
DLSQKLTIHQLQNLKSKFQLLSDKFNNSVKTRLSNHDQLYLFDGISFADDVTIKYFADGK
IQTTAEQYKERSEQFDDAMKQLEEVEYCIPVIEENKQTQDQDNIPPITVATNAEGQVNEM
IEKPEDLDEVIVLRKTNKNKSIKNKPKNREEPELEIIDYFKTAKVLTNDKNSRGGRNNNG
NKRKRFDPYSAANEGPAAPKKRKNVTRGKNVSFKR
NT seq 2268 nt   +upstreamnt  +downstreamnt
atgtctgagcagtcacaagaacaggaaaagactttacttcctaaggtggtaaacacagtt
agagctgcgtcggcgctggccgctcaagatgtcgatttttacaggagtatagataaggat
attgctcattcattagaacagtcctctaaccaaatagctgacatgattaacagtgttctg
ttatccattgatgaaaattcagagcaagtggatggaacaaaggagaacttagaagatata
tggaaggattttggtaatttgatggataatctatttgaaaaatcagataggtctatagat
attataactcgtggacacggtggtagtaatgggcaatccggtatgcaatatattgatgag
ttctcgggcagagatttgacacctgggaaacaaatattgaagccacaattgaaatttact
actcctattgataatacagaatcacatcctttcatcccactattgaaagaaaaacccttt
gcactaaagcccctggaggagtctatgcaaatgattcctgaagatgaaacgtctccaatg
cattacccacaaccgtacgaatatgagattgatcaccaagaatataatgatttaatatta
cagaagaaggacccaataccctctacctcgtggacagataatgaaccaatttgggtggac
acagtatctcaactacaatctataatgcccgatttggaagcctctacggaaattgccgtg
gatttggagcatcacgactatagaacatattacggtattacgtgtctcatgcaaataagt
acgaggaagaatgattatttgatagatacattagcattacgtgaggatttacaaatattg
aataacgttttcgctaatcccatgattacaaaggtattccatggtgcattcatggatata
atttggttacaaagagatttaggtctttatgtggtgggattatttgatacctttcacgca
tcaagagccatgggcttgcccaaacatagtttagcatatttattagaaaagtttgctcaa
ttcaagacttccaagaaataccaactagcagattggagaattagaccactctcgaaggca
atgcacgcgtacgcaagagcagatacgcatttcttattaaacatttttgatcaaatgaga
aattctctaattgaacaaaataagttagccggcgtgttaaaagaatccagaaatgttgcc
aagagaagatttgaatattccagctttagacctaaagtgctacaaacgaatgggttagtt
tattctcctattgaaaaggatgatccatggaaaactatcatgttccaatataatattccc
ccacagaaggagcctcttttgaaagagttgtaccaatggagagataagattgctagaaga
gatgatgaatcgccaagattcgtaatgcccaatcagttattagtatcattggtagcgtac
actccgattgatgcacctggtgttgtttcagtgagcaattcagtcacagattatgttaga
tccaattcaaagatattagcaaaccttatcaaaaattgtcttgccaagatgaaggacaac
aaatttttggataacaatgttgcggaagagggaatttcagtagtaccagaaacaggtcat
gatctttcacaaaagttaacgatacaccaattacagaacttgaaatccaaattccagttg
ttaagtgataagtttaataactctgtgaagacaagattatcaaaccatgatcagttatat
ctattcgatggtatttcctttgctgatgatgtaacaattaaatattttgcagatggtaag
attcagacaactgcggagcaatataaggaacgttctgaacaatttgatgacgccatgaaa
caattagaggaagttgaatattgtatacctgttattgaagaaaacaagcaaacccaggat
caagataacattccaccgatcaccgtggccactaatgctgaaggtcaagtcaatgaaatg
atagagaaaccagaggatttggacgaagtcattgtgctcagaaagacgaataagaacaag
agtataaagaacaagccaaagaacagagaagaaccggaattggagattattgattatttc
aagactgctaaagttcttacaaatgataaaaattcaagaggaggacgtaataataatggc
aacaagaggaaaagatttgatccttattctgctgcaaatgaaggtcccgctgctccaaag
aagagaaagaatgtgactagagggaagaacgtctcatttaagaggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system