KEGG   Nitrosomonas europaea: NE0785
Entry
NE0785            CDS       T00130                                 
Symbol
uvrB
Name
(GenBank) Helicase subunit of the DNA excision repair complex
  KO
K03702  excinuclease ABC subunit B
Organism
neu  Nitrosomonas europaea
Pathway
neu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:neu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NE0785 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:neu03400]
    NE0785 (uvrB)
DNA repair and recombination proteins [BR:neu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NE0785 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      NE0785 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DEAD AAA_22 AAA_30 AAA_18 DUF87
Other DBs
NCBI-ProteinID: CAD84696
UniProt: Q82WA9
Position
complement(851792..853879)
AA seq 695 aa
MIITFPGSPYKLNQAFQPAGDQPEAIRILVEGIESGLSFQTLLGVTGSGKTFTIANMIAR
LGRPAIIMAPNKTLAAQLYAEMREFFPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSSI
NEHIEQMRLSATKSLLEREDAIIVATVSCIYGIGDPVDYHGMILHVREHEKISQRDIIQR
LTGMQYQRNEFEFARGTFRVRGDVLDVFPAENSETALRISLFDDEVESMTLFDPLTGQTR
QKVSRYTVYPSSHYVTPRSTTLRAIETIKTELTGRLNYFHENHKLVEAQRLEQRTRFDLE
MLNELGFCKGIENYSRHLSGRQPGDPPPTLIDYLPDNALMIIDESHVTVPQIGGMYKGDR
SRKENLVAYGFRLPSALDNRPLRFEEFEKLMPQTIFVSATPADYEIQRSGQIAEQVVRPT
GLVDPVIIIRPVTTQVDDLMSEVSLRAAQNERVLVTTLTKRMAEDLTDYFSDHGIRVRYL
HSDIDTVERVEIIRDLRLGKFDVLVGINLLREGLDIPEVSLVGILDADKEGFLRSERSLI
QTMGRAARHVNGTVILYADKITNSMRRAIDETERRRNKQKLFNQQNNITPRGVNKRIKDL
IDGVYDSENAAEHRKVAQIQARYAAMDEAQLAKEIQRLEKSMLEAARNMEFEQAAQYRDE
IKNLRSKLFIGIIDPDEIREVPQTAGKKSRRKAGR
NT seq 2088 nt   +upstreamnt  +downstreamnt
gtgattattacctttccgggcagtccttacaagctcaatcaggcattccagccagcaggt
gatcagccggaagcaatccgcatactggtggaaggaatagaatcaggcttatctttccag
acattgctcggcgtaaccggatccggcaaaaccttcaccatcgccaacatgattgcacga
ttgggccggccggccatcatcatggcgcccaacaagacactggctgcgcagctatatgct
gaaatgcgcgaattcttcccggaaaatgcggtcgagtattttgtctcctattacgactac
tatcagccggaagcttacgtaccctcccgcgatctgttcatagaaaaggattcgagtatc
aacgaacatatcgaacagatgcgtctctctgccacaaaatctctgctggagcgagaagat
gccatcattgttgcaacggtatcctgcatttacggtattggtgatccggtcgattatcac
ggcatgatcctgcatgttcgtgaacatgaaaaaatctcgcagcgcgatatcattcagcgc
ctgacaggtatgcaatatcagcgcaacgaatttgaattcgcacgcgggacctttcgtgta
cggggtgatgtactggacgtcttcccggcagagaactcagaaacagccctgcgtatttcc
ctgttcgatgatgaagtagaaagcatgacgctgttcgatccgctcaccggacaaactcgg
caaaaagtatcgcgttacacggtttacccttccagtcattacgtcacaccacgcagcacc
actctgcgggcaatcgaaaccatcaaaaccgagcttaccggacgattgaactattttcac
gaaaaccacaaactggtagaagctcagcgtctcgagcagcgaacacgtttcgatctggaa
atgctgaatgaactgggtttttgtaaaggtatcgaaaactactcacgccacttgtccggg
cggcagcctggagatcctcctcccacactcatcgactatctgccggacaatgcattgatg
atcatcgatgagagccacgtcaccgttccccagatcggcggaatgtacaaaggagatcgc
tcaagaaaagaaaatctggttgcctacgggttccgcctgccttccgcactggataaccgg
ccactcaggttcgaggaattcgagaaactgatgccgcaaaccattttcgtttccgccact
ccggcagattacgagatacagcgcagcggccaaattgcggaacaggtcgtaaggccgacc
ggcctggtggatccggtaatcatcattcgcccggttaccacgcaggtggatgatctgatg
tcagaagtttcattacgtgctgctcagaatgaacgggtgctggtcactaccctgaccaaa
cgtatggctgaagatctgactgattatttttccgatcacggcatccgggtacgctatctg
cattctgatatcgatacagttgagcgagtcgagatcattcgagatttacgccttggaaaa
tttgatgttctggtcggaatcaatctgttgcgggaagggttggatatacccgaagtttcg
ctggttggtatattagatgcagataaggaaggttttctgcgatcagaacgttcactgatt
caaaccatgggccgcgctgcccgacatgtcaatggaaccgtcatcctttatgccgataaa
atcactaattcgatgcgacgagccattgatgaaaccgaacggcgacgcaacaaacagaag
ctgttcaatcagcaaaataatattacgccgcgcggagtcaacaaacggatcaaggattta
atcgatggcgtttacgacagtgaaaatgctgcagaacatcggaaagtcgcacagattcag
gctcgctatgcggcaatggatgaggcacaacttgcaaaggaaattcagcggctggaaaaa
agtatgctggaagcagccaggaatatggaattcgaacaggctgcccagtatcgcgatgaa
ataaagaacctcagaagcaaactcttcattggcataatagaccctgatgagatcagggaa
gtaccacaaacggctggtaagaaatcacgtagaaaagctggcagataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (10)   
   Pfam (10)   
All databases (28)   

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