KEGG   Candidatus Nitrososphaera evergladensis: NTE_02242
Entry
NTE_02242         CDS       T03224                                 
Name
(GenBank) Transcription initiation factor IIB (TFIIB)
  KO
K03124  transcription initiation factor TFIIB
Organism
nev  Candidatus Nitrososphaera evergladensis
Pathway
nev03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nev00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NTE_02242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nev03021]
    NTE_02242
Transcription machinery [BR:nev03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     NTE_02242
 Prokaryotic type
  Archaeal type
    TFB
     NTE_02242
SSDB
Motif
Pfam: TFIIB ORC6 Cyclin_N Rrn7_cyclin_N
Other DBs
NCBI-ProteinID: AIF84296
UniProt: A0A075MS06
Position
1841850..1842695
AA seq 281 aa
MSDKASETRAEWRDFGSESEKRIRTGRHTSLARHDMGLSTTIGKTNRDASGRLIDAENRH
MIDRLRVWDHRIQLGAPSERGLTKAFDELNRTRVKLSLSETMVEKAAYLYRKAYERKLVR
GRSISSLLGACIYLACRELDTPITLKDITAAGNIKRRDVSRSYRLLLTELDIKVPLVDPM
RCVAKIANKAQLNERILRQALSLMRDVAGTGVQVGKAPMCFAATVLYIACRKSGSNITQR
NIAEAAGVTEVSIRNRVREFTKGLDSIDTTTAVPSSPISDA
NT seq 846 nt   +upstreamnt  +downstreamnt
ttgtcagataaggcgtcagaaacccgcgcagaatggcgcgactttggctcagagtcggaa
aagaggatccggacaggtagacacacttcactggcaagacatgatatgggattatccaca
accattggcaagacaaacagggatgcaagcggaaggctcattgatgcggaaaatcgccat
atgattgacagactgagagtgtgggaccatcggatacaactcggtgcaccttctgaaaga
ggtctgacaaaggctttcgacgaactgaaccggacacgggtaaagctgagtctatcagag
acgatggtagaaaaagcagcttatctttacagaaaggcctatgagaggaagctggtacgg
ggaaggagcatctcttcactccttggggcgtgcatttacttggcgtgtagagaactggat
acacctataacgctcaaggatatcaccgctgccggcaatatcaaacgacgggatgtttcg
cggagttataggctcttacttactgaacttgacatcaaagtcccactggttgatccgatg
aggtgcgttgccaagatagcaaacaaggcgcagctaaacgagaggattctcagacaggca
ttatctcttatgcgcgacgttgctggaaccggggtgcaggttggtaaggcgccaatgtgc
tttgccgcaacagtcctttacattgcctgcagaaaaagcggcagcaacataacgcagaga
aacattgctgaagcagctggagtgactgaagtcagcatcagaaacagggtaagagaattc
acaaaagggcttgattcgatcgacaccactaccgctgtcccttcaagtccaatttctgac
gcttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (12)   

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