KEGG   Nocardia farcinica IFM 10152: NFA_47520
Entry
NFA_47520         CDS       T00207                                 
Name
(GenBank) hypothetical protein
  KO
K11779  FO synthase [EC:2.5.1.147 4.3.1.32]
Organism
nfa  Nocardia farcinica IFM 10152
Pathway
nfa00680  Methane metabolism
nfa01100  Metabolic pathways
nfa01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:nfa00001]
 09100 Metabolism
  09102 Energy metabolism
   00680 Methane metabolism
    NFA_47520
Enzymes [BR:nfa01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.147  5-amino-6-(D-ribitylamino)uracil---L-tyrosine 4-hydroxyphenyl transferase
     NFA_47520
 4. Lyases
  4.3  Carbon-nitrogen lyases
   4.3.1  Ammonia-lyases
    4.3.1.32  7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
     NFA_47520
SSDB
Motif
Pfam: Radical_SAM CofH_C
Other DBs
NCBI-ProteinID: BAD59604
NIH_Japan: nfa47520
UniProt: Q5YQD7
Position
complement(4962947..4965544)
AA seq 865 aa
MIEGVTELATPNVPPAPPSPSAMRRALRRARDGVSLNLDEAVVLLHARGDDLADLCRSAA
RVRDAGLESAGRPGTITYSRNVFIPLTRLCRDRCHYCTFVTVPGKLRAEGKGMFLEPDEV
LDIARRGAALGCKEALFTLGDRPEDRWPEAAQWLDERGYDSTLDYLRAVSILVLEETGLL
PHLNPGVMSWAEIARLKPVAQSMGMMLETTATRLFTEKGQCHHGSPDKDPAVRLRAITDA
GRLSVPYTTGILVGIGETLTERAESIMAIRKQHKAFGHIQEVIVQNFRAKDDTAMRDAPD
AGFDEFRATIAVTRLLLGPDVPVQAPPNLVSQQECLALIEAGIDDWGGVSPVTPDHVNPE
RPWPNLDTLRELTEASGFTLVERTSAHPKYVRAGNPWIDPRIGAHVAALTDPVTGLAKAD
ALPVGLPWQEPDESWESAGRTDLNIAIDTEGRNTEARSDAALGQDVVGAFGDWDTIREQV
RDLAVNAPERLDSDVLAALRAAERDPAGLSDDQYLALATADGAELDAVAALADQLRRDTV
GDDVTYVVNRNINFTNICYTGCRFCAFAQRKGDADAFTLSTEEVADRAWEAYVDGATEVC
MQGGIDPDLPVTGYADLVRAVKRRVPSMHVHAFSPMEIVNGASRGGESIADWLTALKEAG
LDTIPGTAAEILDDEVRWVLTKGKLPSSAWIEVITTAHRVGLRSSSTMMYGHVDNPSHWV
GHLRVLRGIQDETGGFTEFVLLPFVHQSAPLYLAGAARPGPTIRDNRAAHALARIMLHGR
IDNIQTSWVKLGIAGTRVMLQGGANDLGGTLMEETISRMAGSQHGSAKTVAELAEIAEGI
GRPVRERTTVYGRVDRRPAPIVPVG
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgatcgagggcgtgaccgagctagcgaccccgaacgtcccgcccgctccgccctccccg
tcggcgatgcgccgggcgttgcgccgggcgcgcgacggggtgagcctcaacctcgacgaa
gccgtcgtgctgctgcacgcccgcggcgacgacctggccgacctgtgccgcagcgccgcc
cgggtacgcgacgccgggctcgagtcggcgggccggcccggcaccatcacctattcgcgc
aacgtcttcatcccgctgacccggctgtgccgggaccgctgtcactactgcaccttcgtc
acggtgcccggcaagctgcgggccgagggcaagggcatgttcctcgagcccgacgaggtg
ctcgacatcgcccgccgcggcgccgccctcggctgcaaggaggcgctgttcaccctcggc
gaccggcccgaggaccgctggccggaggccgcgcagtggctcgacgaacgcggctacgac
tccacgctggactacctgcgcgccgtctcgatcctggtgctcgaggaaaccggcctgctg
ccccacctcaaccccggtgtgatgagctgggcggagatcgctcggctcaagccggtcgcc
cagtcgatgggcatgatgctggagaccaccgccacccggctgttcaccgagaaggggcaa
tgccaccacggcagccccgacaaggacccggcggtgcggctgcgcgccatcaccgacgcg
ggcaggctctcggtgccctacaccaccggcatcctggtcggcatcggcgagacgctcacc
gagcgggccgagtcgatcatggcgatccgcaagcagcacaaggccttcgggcacatccag
gaggtgatcgtccagaacttccgcgccaaggacgacaccgccatgcgcgatgcccccgac
gcaggcttcgacgagttccgggccaccatcgccgtcacccgcctgctgctcgggccggac
gtgccggtgcaggcgccgccgaacctcgtctcccagcaggagtgcctggcgctgatcgag
gcgggcatcgacgactggggcggggtctccccggtgacgccggaccacgtgaacccggag
cggccgtggccgaacctggacaccctgcgcgagctcaccgaggccagcggcttcaccctg
gtcgagcgcacctcggcgcacccgaagtacgtgcgggcgggcaatccgtggatcgacccg
cgcatcggcgcccacgtcgccgcgctcaccgacccggtgaccggcctggcgaaggccgac
gcgctgccggtgggtctgccctggcaggagccggacgagtcgtgggagtcggcgggccgc
accgacctcaacatcgccatcgacaccgagggccgcaacaccgaggcgcgcagcgacgcc
gccctcggacaggacgtggtcggcgccttcggcgactgggacaccatccgcgagcaggtc
cgcgacctggccgtgaacgcgcccgaacggctggactccgacgtgctcgccgcgctgcgc
gccgccgaacgcgacccggcggggctctccgacgatcaatacctggcgctggccaccgcc
gacggcgccgaactcgacgcggtcgccgcgctggccgaccagttgcgccgggacaccgtc
ggcgacgacgtgacctatgtcgtcaaccgcaacatcaacttcaccaacatctgttacacc
ggttgccggttctgcgcgttcgcccagcgcaagggcgacgccgacgcgttcacgctgtcc
accgaggaggtcgccgaccgcgcctgggaggcctacgtcgacggcgccaccgaggtctgc
atgcagggcggcatcgaccccgacctgccggtgaccgggtacgcggatctggtgcgggcg
gtgaagcggcgggtgccctcgatgcacgtgcacgcgttcagcccgatggagatcgtcaac
ggcgcctcccgcggcggcgagagcatcgccgactggctgaccgcgctcaaggaggcgggc
ctggacaccatcccgggcaccgccgccgagatcctcgacgacgaggtgcgctgggtgctc
accaagggcaagctgcccagctcggcctggatcgaggtgatcaccaccgcgcaccgcgtc
gggctgcggtccagctcgacgatgatgtacgggcacgtggacaatccgagccactgggtc
ggccatctgcgcgtgctgcgcggaatccaggacgagacaggcggtttcaccgaattcgtg
ctgctgccgttcgtgcaccagagcgcgccgctgtatttggcgggcgcggcgcggcccggc
ccgaccatccgcgacaaccgggccgcccacgcgctggcgcggatcatgctgcacgggcgg
atcgacaatatccagaccagctgggtcaagctcggcatcgcgggtacccgggtgatgttg
cagggtggcgccaacgatctgggcggcacgctgatggaggagaccatctcgcgcatggcc
gggtcgcagcacggttcggcgaagaccgtggccgagctggccgagatcgccgagggcatc
ggcaggccggtgcgcgaacgcaccaccgtctacggccgggtggaccggcggcccgcgccg
atcgtgccggtcggctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NIH_JAPAN (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (41)   

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