KEGG   Nothobranchius furzeri (turquoise killifish): 107377603
Entry
107377603         CDS       T05163                                 
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
  KO
K24070  poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
Organism
nfu  Nothobranchius furzeri (turquoise killifish)
Pathway
nfu03410  Base excision repair
nfu04210  Apoptosis
nfu04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:nfu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107377603 (parp1)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    107377603 (parp1)
   04217 Necroptosis
    107377603 (parp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nfu03032]
    107377603 (parp1)
   03036 Chromosome and associated proteins [BR:nfu03036]
    107377603 (parp1)
   03400 DNA repair and recombination proteins [BR:nfu03400]
    107377603 (parp1)
Enzymes [BR:nfu01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.2  Pentosyltransferases
    2.4.2.30  NAD+ ADP-ribosyltransferase
     107377603 (parp1)
DNA replication proteins [BR:nfu03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107377603 (parp1)
Chromosome and associated proteins [BR:nfu03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    107377603 (parp1)
DNA repair and recombination proteins [BR:nfu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     107377603 (parp1)
SSDB
Motif
Pfam: PARP PARP_reg zf-PARP PADR1_N WGR PADR1_Zn_ribbon BRCT BRCT_2
Other DBs
NCBI-GeneID: 107377603
NCBI-ProteinID: XP_015802806
UniProt: A0A1A8V0V4
Position
sgr04:49384229..49395259
AA seq 1015 aa
MADSQDDKLYKAEYAKSGRASCKKCKESIAKDSLRMALMVQSPMFDGKVPHWHHFSCFWQ
RAAAQTEADIAGFSTLRWEDQQKVKKAIETGGAVGAGKSDSKGAAQGAKTLNNFAVEYAK
SNRSTCKGCEQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVSRREELVFKPDYSAA
QLKGFDALRAEDKNDLKKRLPAVKSEGKRKGDDVDGASKKLKKEEEEEKNKLEEQLKNQS
QLIWGIKDKLKKHCSINDMKELLIANAQDVPSGESNVVDCLADGMAFGALEVCKECCSQL
VFKEDAYYCTGDISAWTKCVFKTRRPARRDWVTPKEFHEVPFLKKFKFKRQDRAYPREAP
AQTLTAAKTEPLPSASGGPTKQGPESAPSDKPLTGLKLLAVGKLTKNKDDIKAVVEELGG
KITSTAAKAFLCLSSKKEVEKMGKKMEEVRDAGVRVVSEDFLADIKSSGKALQELVSLHA
ISPWGAEVKVEAQASSTASKSAAPAAKSSGRVKEEEGGSKSKKMKLTVKGGAAVDPDSGL
ENSAHVLEQSGKMYSATLGLVDIVRGTNSYYKLQLLEDDVHKRYWVFRSWGRVGTTIGGN
KLDKFQDKISAMDNFLGLYKEKTGNNWSASNFTKYPNKFYPLEIDYGQDEEAVKQLTATA
GTKSKLAKPVQELIKMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLTDVQQA
VSDCVPEAQILDLSNRFYTLIPHDFGMKKPPLLNNLDYVQAKVEMLDNLLDIEVAYSLLR
GGAQDNERDPIDINYEKLKTKMEVVDKTTQEAEIIMQYVKNTHAATHNTYTLEVQEIFKI
VREGEHQRYRPFEELHNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFAD
MVSKSANYCHTSQSDPVGLILLAEVALGNMHELKKASHITKLPKGKQSVKGLGRTAPDPN
ATVNLNGVHVPLGKGVHTNIDDTSLLYNEYIVYDVAQVNMKYLLKIKFNYQTSLW
NT seq 3048 nt   +upstreamnt  +downstreamnt
atggcggactcccaagatgacaagctctacaaggcggaatacgcgaaaagcggccgggct
tcgtgcaagaaatgcaaagagagcatagctaaggactcgctgaggatggccctcatggtg
cagtccccgatgttcgatgggaaagtcccacactggcaccacttctcctgcttctggcag
cgagcggcagctcagactgaagcagacatcgccgggttctccactcttcgctgggaggac
cagcaaaaagtcaaaaaggctattgagactggaggagctgtcggagcagggaaaagtgat
tcaaaaggtgccgctcaaggggccaaaactctgaataactttgccgtggagtacgccaag
tcgaaccgcagcacgtgcaaaggctgcgagcaaaaaatagaaaaggatcagattcgtgtt
tccaagaaaacggttgacccagagaaacctcagctgggtctgatcgaccgctggtaccac
acggcgtgcttcgtgagccgcagggaggaactggtgtttaagcccgattattccgccgcc
cagctgaagggattcgacgcgctgcgcgccgaagacaagaacgatcttaagaagaggctc
cctgctgtcaaatctgaggggaaacgcaaaggtgatgatgttgatggagcatcaaaaaaa
ctaaagaaagaggaagaggaggagaagaataaactggaggagcaactgaaaaaccaaagc
cagctgatttgggggatcaaagacaagctgaagaaacattgttcgatcaacgacatgaag
gagctgctgatcgcaaacgctcaggacgtcccctctggagagtccaacgtggtcgactgc
ctggctgacggcatggcctttggtgctctggaggtctgcaaggagtgttgcagtcagctg
gtgtttaaagaagacgcttactactgcacaggggacatttcagcctggaccaagtgtgtg
tttaaaaccagaagaccggcacgcagagactgggtcactcccaaggaattccatgaagtc
cctttcctaaagaaattcaagttcaagcgacaggacagggcctaccccagagaggcgccg
gcccaaaccctgacagctgctaaaaccgagcctctgccaagtgcgtccggcggaccgacg
aagcaaggaccagaatcggctccttcagacaaacctctcaccggtctgaagctgctggct
gttggaaagctgacgaagaacaaagatgacataaaagctgttgtggaggagctgggaggg
aagatcaccagcaccgccgccaaagccttcctctgcctcagctctaagaaggaggtggag
aagatgggtaagaagatggaggaagtgagggatgccggcgtgcgtgtggtgtctgaagac
ttcctcgcggacatcaagtcatcaggaaaagctcttcaggagctggtctctctgcacgcc
atctcaccctggggagcagaggtcaaagttgaagcccaagcttcatctactgcctccaag
tctgcagcaccggctgccaaaagctccgggagggtcaaggaggaggaaggtggaagcaaa
tccaagaagatgaagctcaccgtaaaaggtggagctgctgtggatcctgactcgggtctg
gagaacagcgcccatgtcctggagcagagtgggaaaatgtacagcgccaccctgggtctg
gtagacatcgtcagagggacaaactcgtactacaaactgcaactgctggaggatgatgta
cataaacgctactgggtgttcagatcctggggcagagtgggaaccaccatcggaggaaac
aagctggacaaattccaggataaaatctcagcgatggataatttcctcggcctttacaag
gaaaaaacaggaaataactggagtgcctccaacttcactaaatatcctaataagttttac
ccgctggagatcgactatggacaggacgaggaggcggtgaagcagctgacagccactgct
ggcaccaagtccaaactggccaaacccgttcaggaactgatcaagatgatctttgatgtt
gaaagcatgaaaaaagccatggtggagtttgaaatcgacctccagaagatgcctctgggt
aagctgagtaaaagacaaatccagagtgcctacgctctcctgacggacgtgcagcaggcc
gtgtcggactgcgtcccagaggcacagatcctggatctgtccaatcgcttctacacgcta
atacctcacgacttcggcatgaagaagccccccctccttaacaacctggattacgttcag
gctaaagtggagatgctggacaacctgttggacatcgaggtggcctacagcctgttgaga
ggaggagctcaggacaacgagcgcgaccccatcgacatcaactatgagaaactcaaaacc
aaaatggaggttgttgacaaaaccacacaggaagcagagatcattatgcagtacgttaag
aacacgcatgccgctacgcacaacacgtacacgctggaagtgcaagaaatctttaaaata
gttcgtgaaggagagcaccaacgctaccgtccattcgaggagctacacaaccgacagcta
ttgtggcacggctctcgcaccacgaattacgcaggaatcctgtctcagggtcttcgtatt
gcccctccagaagctcctgtgactggctacatgtttggcaaaggtgtttactttgctgat
atggtgtccaagagtgccaactactgtcacacctcgcagtcggaccctgtaggcctcata
ctgctggcagaggttgccctgggaaacatgcatgagctgaagaaggcctctcatattaca
aagttaccaaagggcaaacaaagtgttaaaggtttgggtcgaactgctcctgatccaaat
gctactgtcaatttgaatggcgtgcatgtgcctctgggaaaaggcgtccacactaacatc
gatgacacaagtctactgtacaacgagtacattgtttatgatgtggcacaggtaaacatg
aagtatctcttgaagatcaagtttaattaccagacatccctgtggtag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (49)   

Download RDF
DBGET integrated database retrieval system