KEGG   Naegleria gruberi: NAEGRDRAFT_32409
Entry
NAEGRDRAFT_32409  CDS       T01241                                 
Name
(RefSeq) hypothetical protein
  KO
K12590  exosome complex component RRP46
Organism
ngr  Naegleria gruberi
Pathway
ngr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NAEGRDRAFT_32409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngr03019]
    NAEGRDRAFT_32409
Messenger RNA biogenesis [BR:ngr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     NAEGRDRAFT_32409
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 8859382
NCBI-ProteinID: XP_002679009
JGI: Naegr1_32409
UniProt: D2VA88
AA seq 280 aa
MNKQILRRDQRKTSNQLRDMQVELGVLGKADGSVKFSQGNTTVICSVCGPESSMKEKGDQ
AIIDVMFQPRDKKASEEEKEYELIIRQTLENVILTNIYPRTVITISIQVVQYDGCLLSAS
LNAASLALLDAGVAMKTTLVSSSCSYLNSGDCLLDPTRIEQDFSSILHNDDSSSYIQYYK
TSSKGPKVIVPKGFAFFVFDSAPLRNPSKTDSDDDSFLVTSITEGLLTDEALRECISLAK
EGALSVYSLIRLTLERKSTTPVLPTNKVVASNNFIKPKDN
NT seq 843 nt   +upstreamnt  +downstreamnt
atgaacaagcaaattttaagaagggatcaacgtaaaacctccaaccaactcagagatatg
caagtcgagttgggagtgttgggaaaagctgatggaagtgttaaattttctcagggaaat
accacagtaatttgttcagtttgtggaccggaatcatcaatgaaggaaaaaggagatcaa
gctattattgatgtcatgtttcaaccaagagataagaaggcttcggaagaggaaaaagaa
tatgaattaattattagacaaacattggaaaatgtgattttaacaaatatatatccaaga
actgttataacaatttcgattcaagtggttcaatatgatggatgtttattgagtgcgagt
ttaaatgctgcatcattggctcttcttgatgctggagttgctatgaaaacaacacttgtt
tcatcatcttgttcatatttaaatagtggtgattgtttgttggatccaacgagaattgaa
caagatttttcatcaattttacacaatgacgattcatcatcatacattcaatattacaag
acatcatcaaaaggaccaaaagttattgtaccaaaaggatttgccttctttgtttttgat
tctgctcctctccgaaatccatctaaaacagattctgatgacgattcctttcttgtcacc
agtattactgaaggtttattaacagatgaagctttaagagaatgtatttcattagcaaaa
gaaggagccttgtcagtttattctctcattcgtttaactcttgaaagaaagtcaactact
cctgttttacctacaaataaggttgtagcttcaaataatttcataaaacctaaggataat
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (33)   

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