KEGG   Naegleria gruberi: NAEGRDRAFT_34909
Entry
NAEGRDRAFT_34909  CDS       T01241                                 
Name
(RefSeq) 3'-5' exoribonuclease/RNA-binding protein-like protein
  KO
K12587  exosome complex component MTR3
Organism
ngr  Naegleria gruberi
Pathway
ngr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NAEGRDRAFT_34909
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ngr03019]
    NAEGRDRAFT_34909
Messenger RNA biogenesis [BR:ngr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     NAEGRDRAFT_34909
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 8858886
NCBI-ProteinID: XP_002682945
JGI: Naegr1_34909
UniProt: D2UZQ3
AA seq 300 aa
MSSSSSITNILNPTSTASLLNQPPALSVRPIYPSNNNTTKNNNTTINNNNATSSKNLINI
ETGKRQDNRTCDKFRNVFMQVGVIKQARGSAYMEYQNGTKVICSVYGPRQISARNEFSDI
GAIQCEYRVANFAYQSSNNQSTFLNNSSNNNRRHHVENSIHLREALEVSIRLDKYPKSVI
DVYCFILQDDGSALSAAISCASLALANAGIEMYDMVSACTTSELEGHIIVDPTNLEYKYA
SGGMVCAYMSNLNQVTQLSQVGDMSYQKIGEAMDLCIDGCSKLNQLMQQCLLNNSSTNEK
NT seq 903 nt   +upstreamnt  +downstreamnt
atgtcatcaagtagcagcattaccaatattttaaatccaacatcaacagcttcactcttg
aatcagcctcctgcactttcggtgagaccaatctatccatcaaacaataatacaacaaag
aataataataccactattaataataacaatgctactagtagtaaaaatttaattaatata
gaaacaggaaaaagacaagataatcgtacatgtgataaattccgtaatgtattcatgcaa
gttggagtgataaaacaagcacgtggaagtgcctatatggaatatcaaaatggaactaaa
gtaatttgttcagtctatggaccaagacaaatcagtgccaggaatgaatttagtgatatc
ggagcaatacaatgtgaatatagagttgctaattttgcttatcaatcttcaaataatcaa
tcaacatttttaaataattcaagtaataataataggagacatcatgttgaaaattctatt
catttacgtgaagctttggaggtttcaattagattggataaatatccaaagagtgttatt
gatgtatattgttttattttacaagatgatggaagtgctttgagtgctgctattagttgt
gctagtttagctcttgcaaatgctggcattgaaatgtatgatatggttagtgcttgtaca
acaagcgaattggaaggtcatattattgttgatccaactaatttggaatataaatatgca
agtggtggtatggtttgtgcttacatgtccaatttaaatcaagtaactcaattatctcaa
gttggtgatatgagttatcagaaaattggtgaagctatggatttatgtattgatggttgt
tctaaattaaatcaattaatgcaacaatgcttattgaacaatagttcaacaaatgaaaaa
taa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (38)   

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