KEGG   Naegleria gruberi: NAEGRDRAFT_77709
Entry
NAEGRDRAFT_77709  CDS       T01241                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase
  KO
K13181  ATP-dependent RNA helicase DDX27 [EC:5.6.2.7]
Organism
ngr  Naegleria gruberi
Brite
KEGG Orthology (KO) [BR:ngr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ngr03041]
    NAEGRDRAFT_77709
   03009 Ribosome biogenesis [BR:ngr03009]
    NAEGRDRAFT_77709
Enzymes [BR:ngr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     NAEGRDRAFT_77709
Spliceosome [BR:ngr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    NAEGRDRAFT_77709
Ribosome biogenesis [BR:ngr03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    NAEGRDRAFT_77709
SSDB
Motif
Pfam: DEAD Helicase_C
Other DBs
NCBI-GeneID: 8863903
NCBI-ProteinID: XP_002683087
JGI: Naegr1_77709
UniProt: D2UXS9
AA seq 887 aa
MSHKRKRLQLNDDDLIEGRALYSSSDEDSDNEDFNDIPQQYDSDNEREYKKNVHRLAADE
DEESTNEQAIPSSTKKFSFDVRGSDLGKRLTRKINQNPKINKAIKSKSIFNDEEEQEVSD
EEEEEQGENNILLRAMRNDSDEEENGQVSAFDVPPSAYGNLDEEDEELDEEDGELERGNE
DDDVDEMNDDEEIPDDDDVDEMNGDEEDGEISENNDEEEELGRHDIIKTLGKASNSIDKK
ENNIIDEKDEDNYDTSFFSEAPADIEVSKSFNDMNLSRPLLKAIYEKGYEHPTPIQSRCI
PLLLKGRDICASAMTGSGKTAAFILPTLERLLYRDRSRKETLVVALLPTRELAAQCYEDC
SHFLQYTDIRCCLITGGNLKIQKQIQVLQSKPEIIIATPGRVVDHLLNSPNFRLDEVEVL
ILDEADRLLELGFEPQIKTILDHIPTARQTMLFSATMTDDIEQLVKLSLKNPIRVSCDSR
TGVASGLTQEFIKLADDENIIMKQAILLSLCTRSFPSEVIIFCNTKSMVRKLKMLLFLKG
LKVSELSSSLTQAVRLKELYKFASHETDFLVCTDVASRGLDIKGVKTVINFDMPLNLKTY
IHRVGRTARAGASGVAVSMSSESSIAILRKIVRHSKKKGQSVQQRVIPTESIEFWTDKIE
EMKPQLKELEQQLRMEEEMQQAEMLAAKNENIEEFREDIMSRPRKEWIMSKAQREELNEK
AKAQMVEQDEPTKKKRKLDPEEYENEEEMLAKQPAVEYMDYLEKKPVDKKKKKKESFKRE
MKEMGIKNWDSYVRKSGKQAKLIHKLKRNHIESDLIHKDKKEKIMQQKEKRKAKLAFKEK
KKAKVERIKQQRGAQDKKSEKRAADAFKKTKKQSHSGFKSSKKYKRR
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgtctcacaagagaaagcgattacagctaaatgatgatgaccttatagaaggaagagca
ctctatagtagtagtgatgaggattccgataatgaagattttaatgacattcctcaacag
tatgacagcgataatgagagggaatataaaaagaatgtacacagacttgctgctgatgaa
gacgaagaatcaacaaacgagcaagcaattccaagtagtaccaagaaattctcttttgat
gttagaggttccgatcttggaaaacgtcttacaagaaagattaaccaaaatccaaaaatt
aacaaggctattaaatctaaatcaatttttaatgatgaagaggaacaagaagttagtgat
gaagaagaggaagagcaaggagaaaataacatccttttaagagcaatgagaaatgattcc
gatgaagaagaaaatggacaagtttcagcattcgacgtacctccttctgcgtatggcaac
ttggatgaagaggatgaagaacttgatgaagaggatggagagcttgaaagaggtaacgaa
gatgatgacgtagatgaaatgaatgatgatgaagaaataccagatgatgatgacgtagat
gaaatgaatggtgatgaagaagatggagaaatttcagaaaataatgatgaagaagaagag
cttggtagacatgatattattaaaacacttggcaaagctagtaactcaatagacaaaaag
gaaaacaatattatagatgaaaaagatgaggacaattacgacacatcattcttctctgag
gcacctgctgatattgaagtttccaaatcatttaatgatatgaatttgtcacgcccactc
ttaaaagccatctatgaaaagggatatgaacatccaacaccaatccagtccagatgtatt
cctcttttgttaaaaggtagagatatttgtgctagtgcaatgacaggttctggtaaaaca
gcagctttcatcttgccaacattggaaagattattgtacagagatagatcaagaaaggaa
actcttgtagttgcattgcttcctacaagagaattggcagctcagtgttacgaagattgc
agccattttttacaatatacagatattagatgttgcttaattacgggaggaaaccttaaa
atccaaaaacaaattcaagttttgcaatcaaagccagaaattattattgcaacaccggga
agagttgtggatcacttactcaactctccaaacttccgtcttgatgaagttgaagtacta
atcttggatgaagctgacagattactggaattaggttttgaacctcaaatcaaaacaatc
ttggatcacattccaacagcaagacaaacaatgttattctcagcaacaatgacagatgac
attgaacaattagtgaaactctcattaaagaatccaatcagagtttcttgcgattcaaga
acaggtgttgcaagtggattgactcaagagtttatcaaacttgctgatgatgaaaatatt
atcatgaagcaagctatattactttccttgtgtacaagatctttcccaagtgaagtaata
atattttgtaacacaaaatctatggtaagaaaactgaaaatgttattatttttgaaagga
ctaaaagtgtctgaacttagctcatctcttacacaagctgttagattgaaggaattatat
aaatttgccagccatgaaacagactttttagtgtgtacagatgttgcctctagaggtttg
gatattaaaggcgtaaagacagttatcaattttgatatgcctctaaatttgaaaacctat
attcacagagtaggtcgtacagctcgtgctggtgcatcaggtgttgctgtttcaatgagt
agtgaaagtagcattgctatcttgagaaaaattgttcgccactcaaagaaaaagggacaa
tcagtacaacaaagagtaataccgacagaatctatagaattttggacagataaaattgaa
gaaatgaaaccacaactcaaagaattagaacagcaattaagaatggaagaagaaatgcaa
caggctgaaatgttagctgccaagaatgaaaatatcgaagagtttagagaggatattatg
agtagacctagaaaggaatggatcatgtctaaggctcagagagaagaattgaatgaaaag
gcaaaagcccaaatggttgaacaagatgaaccaacaaagaagaaacgtaaattagatcct
gaggaatatgaaaacgaagaagaaatgttagctaaacaacctgctgttgaatatatggat
tatctggaaaagaaacctgttgataaaaagaagaaaaagaaggaatcttttaagagggaa
atgaaggaaatgggcatcaagaactgggattcatatgtaagaaaatctggaaagcaagca
aaactcatccacaaacttaagcgtaatcatattgagtctgatttgatccataaggataaa
aaggaaaaaatcatgcaacaaaaagaaaagagaaaggcaaaacttgcctttaaggaaaag
aaaaaagcaaaggttgaacgaatcaagcaacaaagaggagcccaagacaaaaaatcagag
aaaagagctgctgatgctttcaaaaagactaagaaacaatctcactcaggtttcaagagc
tctaagaaatataagagaagataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (51)   

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