KEGG   Nocardiopsis gilva: CDO52_02245
Entry
CDO52_02245       CDS       T05022                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
ngv  Nocardiopsis gilva
Pathway
ngv00521  Streptomycin biosynthesis
ngv00523  Polyketide sugar unit biosynthesis
ngv00525  Acarbose and validamycin biosynthesis
ngv00541  O-Antigen nucleotide sugar biosynthesis
ngv01055  Biosynthesis of vancomycin group antibiotics
ngv01100  Metabolic pathways
ngv01110  Biosynthesis of secondary metabolites
ngv01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:ngv00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    CDO52_02245 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    CDO52_02245 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    CDO52_02245 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    CDO52_02245 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    CDO52_02245 (rfbB)
Enzymes [BR:ngv01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     CDO52_02245 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 NAD_binding_10
Other DBs
NCBI-ProteinID: ASU81765
UniProt: A0A223S0V2
Position
436389..437399
AA seq 336 aa
MRLLVTGGAGFIGSEFVRATLRGALPGSSGTHVTVLDKLTYSGNELNLAPIADLPNYRFV
HGDICDRNLVDDVVAGHDAIVHFAAETHVDRSIDSAASFVRTNALGTQVLLEAASRHRLG
RFVHISTDEVYGSISEGAWTEVSPVAPNAPYAAAKAAGDLLALAWHRTRQLDVLVTRCTN
NYGPYQHPEKLIPLFATNLLDGQQVPVYGDGHNRRQWLHVSDHCRAIQLVLLDGRPGEVY
HIGGGTELTNLELAKHILEACGVGWDMVRHVPDRMGHDFRYSLDTAKIRTELGFSPRVAF
EDGLAETVEWYRSNRGWWEPLKSPNEATGSPGDASR
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgcgacttctagtgacgggcggtgccggcttcatcggctcggagttcgtccgggctacc
ttgcgtggcgctctgccgggctcatcgggaactcatgtcaccgttctggacaagttgacg
tattccggaaatgagctcaacctggcgccgatcgcggacctgccgaattaccggttcgtg
cacggcgacatctgtgatcggaacctggtggacgatgtggtggccggacacgacgcgatc
gtgcacttcgccgccgagacacatgtggatcgctcgatcgacagtgccgcttcgtttgtc
cggacgaacgcactgggcacgcaggtgctgctggaagcggcctcccgtcaccgactgggg
cggttcgttcacatctctaccgacgaggtgtacggatcgatttctgagggggcctggacg
gaggtgtccccggtggccccgaacgcgccatacgcggcggccaaggcggcgggggacctg
ctggcgctggcctggcaccggacgcggcagctcgacgtcctggtcaccagatgcaccaac
aactacggtccgtaccagcatccggagaagctgatcccgctgttcgcgaccaatctcctg
gacgggcagcaggttccggtgtacggcgatggccacaaccgccgtcagtggctacacgtg
tcggaccactgtcgcgccatccagttggtgctcctcgatggtcggcccggggaggtttac
cacatcggcggtggcaccgagttgaccaacctcgaactggccaaacacatcctcgaggcc
tgtggtgtcggctgggacatggtgcggcatgttccggacaggatgggacatgatttccgc
tattcactggacaccgccaaaattcgtacggaactcggtttctcgcctcgtgtcgcgttc
gaggacgggctggcggagacagtggagtggtaccgcagtaaccgaggttggtgggaaccg
ctcaagagtcccaacgaagcgacgggttcacccggcgacgccagcaggtga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (8)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (28)   

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