KEGG   Nitrosococcus halophilus: Nhal_1154
Entry
Nhal_1154         CDS       T01198                                 
Name
(GenBank) ABC transporter, inner membrane protein
  KO
K25151  gliding motility-associated transport system permease protein
K25153  gliding motility-associatede transport system auxiliary component
Organism
nhl  Nitrosococcus halophilus
Brite
KEGG Orthology (KO) [BR:nhl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:nhl02000]
    Nhal_1154
Transporters [BR:nhl02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Gliding motility-associated transporter
    Nhal_1154
SSDB
Motif
Pfam: ABC_transp_aux ABC2_membrane_2 ABC2_membrane_3 ABC2_membrane_5 ABC2_membrane_4 DUF4350
Other DBs
NCBI-ProteinID: ADE14321
UniProt: D5BZM6
Position
1144160..1147084
AA seq 974 aa
MGNALRIARKEFAGFFSSPTAFIFLGAFLAVTLFIFFWVETFFARNIADVRPLFEWMPLL
LIFLVAAITMRMWSEERRAGTLEFLLTTPVKSYQFVLGKFFACLALVAVALLLTLPLSLT
VSLVGPLDWGPVFGGYLATLFLAAAYAAIGLFVSARSPNQIISLILTAVVCGFFYLLGSD
ALTGLFGNRVSEFLKLLGSGSRFDSITRGVIDLRDLYYYLSLVGVFLSLNVFALEWLRWA
GNPSNTHHRRWGWVTGLLVANFLAANLWLAPLGWVRADVTQGNIYSISEATRSYLAQLRE
PMLIRGYFSAQTHPLLAPLVPRLRDLLEEYGVAGEGQVRVEFIDPQAHPELEQEANEKYG
IQPVPFQFASKYQASVVNSYFNILIQYGDQYEVLGFQDLIEIKVQSETDLDVELRNPEYD
ITQAIKKVLYAYQGASELFENIPHPVSFKGYISADEKLPEVLQSLRQDLEVLLDELREES
GGKMTVDIRDPDAEGGALAEQIRSEFGFRPMAASLLDANTFWFYMTLEGEGRTIQVPLPE
NYEKAGLERSIDAALKRFSRGFLKTVALHTPPSTPSLPQFGMAGGGKRFNWLRDTLAEEH
NVTAADLKNGQVPSDTDLLLLVAPDTLDEKQLFAVDQFLMRGGTLVLATAPFDIDTQETL
AASKHDSGLKDWLAHHGLQLGEQMVLDPQNAAFPIPVDRQVGGFVVQETQLVDYPYFIDI
RNDGMSQEGDITAGLNQVTMTWASPITMDEQKNQGRQVTRLLESSDQSWTSDSLNIQPDF
RAHPQLGFPIGGEQGRQLLGVMVEGRFDSFFKDKPSPLATVEEEADPDNEETAAGAEESE
SKNPENEETPEPVITRVIERSPESSRILLFASNSFLTDEMLDLAAAGLGTRYLKPVELVE
NAIDWSLEEEGLLAIRGRAQFSRTLAPLGRDAQMFWEYLNYGLALFGLLLVWLLRRQVNQ
QARRRYAAVLGTAK
NT seq 2925 nt   +upstreamnt  +downstreamnt
atggggaatgcactgagaattgcgcgcaaagagtttgccggctttttctcctcgcctacc
gcttttatctttctcggcgcctttctggcggtcactctgttcatcttcttttgggtggaa
acctttttcgcccgtaatatcgccgatgtgcggcccctgttcgaatggatgccgctattg
ctgatttttctggtggcggccatcaccatgcgcatgtggtcggaggagcggcgcgccggc
actctggagtttttgctcaccacaccggtcaaaagctatcagttcgtgcttggcaagttt
ttcgcctgtctggcattggtggccgtggcgctgctgttgactctgcccctgtcactgacc
gtgagcctcgtgggccccttggactgggggccggtgtttggagggtacctggccacgttg
tttctagcagccgcttatgccgccatcgggttattcgtgagcgcccgttcgcccaatcag
atcattagcctgattctgacggcggtagtctgcggttttttttatttgctgggttccgat
gccctgactgggctattcggcaaccgggtttcggagtttcttaaactattgggttctggc
tcacgctttgactccatcacccgtggcgtgattgatctacgggatctctactattatttg
agtctggtcggggtttttctctccctgaatgttttcgcattggaatggctgcgttgggcc
ggtaacccgagcaatacccaccatcggcgctgggggtgggtgactggattattagttgcc
aacttcctggcggccaatctgtggttggcgcccctgggctgggtccgcgccgatgtcacc
cagggcaacatctactccatctccgaggcgacccgaagctacctggcgcagctgcgggag
cccatgctaattcgcggctacttcagcgcccagactcatccgttgttggcgccgttggtg
ccccgcctgcgtgatttgctggaagagtatggggtagccggcgagggccaggtgcgggtt
gaattcattgacccccaggcccatccggagctggaacaggaggccaacgaaaagtatggt
attcaaccagtgcccttccagttcgccagtaagtatcaggcttcggtggtcaattcctac
ttcaatattctgattcaatatggggatcagtacgaggtcttaggtttccaggatcttatt
gaaatcaaggtccagagcgagaccgatttggatgtggagctgcgtaatcccgagtacgat
atcacccaggccatcaagaaggtgctttacgcctatcaaggggccagcgaactgttcgag
aatatcccccatccggtgagtttcaaggggtatatctcggcggatgagaagttgccagaa
gtgctccagtcgctccgtcaggatttggaagttttactcgatgagctgcgtgaggagtcg
ggcggcaagatgaccgtggatatccgcgacccggatgccgaagggggcgcattagccgag
caaatcagaagcgaattcggttttcgccccatggccgccagtctgctcgatgccaatacc
ttctggttctacatgactctcgaaggggaaggacgcaccatccaagtacccttgccggag
aactacgaaaaggccgggcttgaacgcagtattgacgccgccctcaagcgcttttcccgg
ggtttcctcaagactgtggccctgcacaccccgccctcgacgccttccttgccccagttc
ggtatggcgggcgggggtaagcgctttaactggctgcgggataccctggcggaagagcac
aatgtcaccgctgcggatctgaaaaacggacaggtgccttccgataccgacctgttgctg
ttggttgcccccgataccctggacgagaagcagctatttgccgtggaccagttcctgatg
cgtggcggcaccctagtattggccactgcgcccttcgatatcgacacccaggagaccctt
gccgccagcaaacacgattcggggctgaaggattggttggcccatcatggtctccagctt
ggggagcagatggtgctcgatccccaaaatgcggccttcccgattccggtggatcgccag
gttgggggattcgtggtgcaggagacccagctggtggattacccctattttatcgatatc
cgcaatgacggtatgtcccaggagggggatatcactgccggcctcaatcaagtcaccatg
acttgggcttcccccatcactatggatgagcagaagaaccaggggcgtcaggtcacccgc
ctgctggaaagttcggatcaatcctggacctccgatagcctcaacatccaacctgacttc
cgcgcccatcctcagctcggtttccccatcggcggggaacagggcaggcaactgttggga
gtgatggtggagggtcgcttcgactccttcttcaaggataaaccctcgcctctggccacg
gtagaggaagaggctgaccccgacaatgaggagacagcagcaggcgccgaggaaagtgag
tccaagaatcccgagaacgaggagacgccggaaccggtgattacgcgggtgattgagcgc
tcacccgagtcatcgcgtatccttctgtttgcttccaacagcttcctcactgacgagatg
ctggatttggctgccgccggattgggtacccgctatctcaagccggtggaattggtggaa
aatgccatcgactggtccctggaagaggagggtctgcttgccatccgtggccgagcccag
ttttcacgcacccttgcacccttaggtcgggacgcccaaatgttttgggagtacctcaat
tatggtctggcgctgttcggtttgctgctggtctggttgctccgcaggcaggtcaaccaa
caggcgcggcggcgctatgctgcagtgttgggtacggccaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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