KEGG   Neorickettsia helminthoeca: NHE_0073
Entry
NHE_0073          CDS       T03076                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
nhm  Neorickettsia helminthoeca
Pathway
nhm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nhm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NHE_0073 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nhm03021]
    NHE_0073 (rho)
   03019 Messenger RNA biogenesis [BR:nhm03019]
    NHE_0073 (rho)
Transcription machinery [BR:nhm03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     NHE_0073 (rho)
Messenger RNA biogenesis [BR:nhm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     NHE_0073 (rho)
SSDB
Motif
Pfam: ATP-synt_ab Rho_RNA_bind Rho_N AAA_25 AAA_22 AAA NACHT Maf
Other DBs
NCBI-ProteinID: AHX11047
UniProt: X5GVI4
Position
complement(66077..67570)
AA seq 497 aa
MTLIKDLAQEGALKTRTNDTLLVEDKQDDVSGKRNTLKLSNRSSKEELDTPAEQPEQNEE
ADHGAFIDLSELRSKTACELLKRAENLNLQNLAGTSKQDLIVLIAQKEVADHPNGKTIVS
SGVAEVLNEGFAFMRSSAYNYLASQDDVYISPGQVRRLGIRTGDSIYGEVRAPKKGERYF
ALAKALEINNNPVSTSRRYIAFESLVPFYPDTPIKLECEKPKKSSDSRSSDLSGRIIDII
APLGRGQRALIVAQPKTGKTILLQNIAHSISSNYPDIHLIILLIDERPEEVTDMRRSVNA
EVVSSTFDEPADKHVYVAEFAIEKAKRLVEQGKHVVILLDSITRLARAYNSVVPSSGKLL
SGGVDSNALQKAKRLFGAARNIEGGGSLTIIGTALVDTGSRMDELIYEEFKGTGNSEIIL
DRKLAEKRLFPAIDITKSGTRKEELLLDRSILNKVWVLRRILNQMTDADAIEFVIDKLQR
TKNNEEFFLFMDKKANG
NT seq 1494 nt   +upstreamnt  +downstreamnt
atgaccctaatcaaagatttagcccaagagggcgcattaaaaacacggaccaatgacaca
ttgttagtagaagataagcaagatgacgtgtcaggcaaaagaaatactttaaaactttcc
aacaggagcagcaaggaggaattggatacgcctgcagaacaacccgaacaaaatgaagaa
gcagatcatggggcattcatagatctgtctgaactccgctccaaaaccgcatgtgagctc
ctcaaaagagcagagaacctgaacttacaaaatctagctggaacatctaagcaggatttg
atagtcctgatcgcacagaaagaggtcgcagatcatccaaatgggaaaactatagtgagt
tctggagtagcagaggtcttaaatgagggttttgctttcatgcgatcctcagcatacaac
tacttggcaagtcaggacgacgtctacatttccccgggacaagttagaagactcggaatc
agaactggtgactcaatttatggtgaggtcagagcaccaaaaaaaggtgagagatatttt
gctcttgcaaaggccctggaaattaataataatccggtctccacctctaggaggtacatt
gcatttgagagcttggtacctttctatcctgacacacccataaaactggaatgtgagaaa
cccaaaaaatcttcagattcgagaagtagcgatttaagtggaagaattattgacatcatt
gcccctctaggaagagggcaaagagcgctgatcgtcgcacagcctaagacaggtaagacc
attttattacaaaatatcgcacattctatttctagtaattacccggacatacatctcatc
attctactaatcgacgagcgtcccgaagaagtcaccgatatgcgtagatctgtaaatgct
gaagttgtgagttcaacattcgatgagccagctgataagcatgtatatgtagcggaattc
gcaattgagaaggcaaagagactcgtcgagcaagggaaacatgtggtaatactgcttgat
tcaattactcgtttggctagggcgtataactccgtggttccctcttctgggaagcttcta
agcggcggtgtcgattccaacgctttgcaaaaggcgaaacgcctcttcggcgcagctcgt
aatattgaaggtggtggttcgctgacaatcattggtacggcacttgttgatactggttcc
aggatggatgagctcatctatgaggagttcaaaggcactggcaactcagaaataattctt
gataggaaactagctgagaagcgactattcccggccattgatataactaaatcgggtacg
agaaaagaggagctcctccttgatagatctattctaaacaaggtgtgggtgctgagacgc
atcctgaaccagatgacagatgcggatgccattgagtttgtaatagataaactccaaaga
acaaaaaataacgaagagtttttcttgttcatggataagaaggcaaatggataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system