KEGG   Nitrosopumilus piranensis: NPIRD3C_1117
Entry
NPIRD3C_1117      CDS       T03656                                 
Symbol
endA
Name
(GenBank) tRNA-splicing endonuclease
  KO
K01170  tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
Organism
nid  Nitrosopumilus piranensis
Brite
KEGG Orthology (KO) [BR:nid00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nid03016]
    NPIRD3C_1117 (endA)
Enzymes [BR:nid01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     NPIRD3C_1117 (endA)
Transfer RNA biogenesis [BR:nid03016]
 Prokaryotic type
  tRNA spricing factors
   tRNA splicing endonucleases
    NPIRD3C_1117 (endA)
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N
Other DBs
NCBI-ProteinID: AJM92329
UniProt: A0A0C5BVQ5
Position
complement(932512..933048)
AA seq 178 aa
MKGELIENRVIVWNIEESRKLFSQGYYGKPIGIPKPKIEEIDAPLILDLIEALYLLENKK
ITISKSKRKVTVEQMTDICKQEHHDFDKKYLVYKNFRDKGYIINPGIKFGCDFAVYEKGP
GIDHAPFLIQVYNRSESITSTGIVLAGRLATTVRKQFILAIPKGKDNVDFLALDWWKA
NT seq 537 nt   +upstreamnt  +downstreamnt
gtgaaaggagagttaattgaaaatagagtaattgtatggaatatcgaagagtcgcgtaaa
cttttcagccaaggatattatggaaagccaataggaataccaaaaccaaagattgaagaa
attgatgcacctcttattttggatttaattgaagcattgtatttgttggaaaataaaaaa
attacaatttcaaaatcaaaacgtaaagttacagttgaacagatgacagatatttgcaaa
caagagcatcatgattttgataaaaaatatctagtatacaaaaattttagagacaagggt
tacattatcaatcccggaataaagtttggttgtgattttgcagtttatgagaaaggtcca
ggaatagatcatgcaccgtttttaattcaagtgtataatcgaagtgagtcaattacatcc
acaggaattgtacttgcaggaagacttgcaacaactgtaagaaaacaattcattttagca
attcccaaaggcaaagacaatgttgactttttagctttagattggtggaaagcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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