KEGG   Candidatus Nitrosopumilus sediminis: NSED_07570
Entry
NSED_07570        CDS       T02303                                 
Name
(GenBank) Pre-mRNA processing ribonucleoprotein
  KO
K14564  nucleolar protein 56
Organism
nir  Candidatus Nitrosopumilus sediminis
Brite
KEGG Orthology (KO) [BR:nir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nir03009]
    NSED_07570
Ribosome biogenesis [BR:nir03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    NSED_07570
 Prokaryotic type
    NSED_07570
SSDB
Motif
Pfam: Nop
Other DBs
NCBI-ProteinID: AFS83306
UniProt: K0BG88
Position
1272803..1274101
AA seq 432 aa
MHSVILTELGISVFNDEKLDKAFAFSNPVKEYLLVKNKESKLNELVNYLASTQRGFSVSD
ESLLAILKKYSIDCHLMDSAELDRVQSTKPQIIVDSGFASNLQDTLGKLREFALGFSSSK
VTEVSESPDLHIIQAINSLDEIDKIANGLSSRLREWYGLHFPELDNIIDSINGYAQIVMA
GKRESLTKQIFEDAGFPESKVEMLSLISSKSRGGDISDINLAIVQSIAKQVLDFHELRKK
LEEHVEKEMQEIAPNLSAILGTAVGARILGRAGSLKKMASLPASTIQVLGAEKALFRSLK
TGSQPPKHGLLFQHAMVHAAPRWQRGKIARAVAAKAVIAARVDVYGEGLNQTLLEKLNIR
VDEIGKKYENPTEKDIRPPPSFRREGSFRDSPRRDSSFLCCFLCRFSISFLCCFLCRFSI
SFLCCFLCRFSI
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgcattctgtaatattaacagagttaggaatctcagttttcaatgatgaaaaactagac
aaagcatttgctttctcaaatcctgttaaagaatatcttttagtgaaaaataaagaatcc
aaattaaatgaacttgtaaattatttagcatctactcagagaggattttctgtaagtgat
gaatcattacttgcaattctaaaaaaatattcaattgattgtcatttgatggattctgca
gaattagatagagtccaatctacaaaaccacaaattatcgtggattcaggttttgcttct
aatttgcaagatacacttggaaaactaagagagtttgctttaggattttcatcttcaaaa
gttaccgaagtctcagaaagcccagatcttcatataattcaagcaattaattctctagat
gaaatcgacaagattgcaaatggattgagttcaagactcagagaatggtatggattgcat
tttccagaattagacaacataattgatagtattaacggatatgcacagattgtaatggca
ggtaaacgagaatcattaactaaacaaatttttgaagatgcaggttttcctgaatcaaaa
gtagaaatgttatcattaatttcttcaaaaagtagagggggagatatttcagatatcaat
ttggcaattgtgcaatcaatcgcaaaacaagttttagactttcacgaattgcgtaagaaa
ctcgaggaacatgttgaaaaagagatgcaagaaattgcaccaaatctttcagcaattctt
ggaactgcagttggtgcaagaattttaggaagagctggtagtcttaaaaaaatggcatca
cttcctgccagcacaatacaagtgctaggagctgaaaaagcattattcagatcattgaaa
acaggttctcaacccccaaaacacggattgttattccaacatgcaatggttcatgcagct
cctagatggcaaagaggaaaaattgcacgtgcagttgctgcaaaagcagtgattgctgct
agagttgatgtatacggtgagggattaaatcaaactctacttgaaaaactcaacataaga
gtcgatgagataggtaaaaaatacgagaatcctactgaaaaagacatcagaccacctcca
tcatttagaagagaaggaagttttagagacagtccaagaagagacagtagctttctttgc
tgctttctttgcaggtttagcatcagctttctttgctgctttctttgcaggtttagcatc
agctttctttgctgctttctttgcaggtttagcatctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (8)   

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