KEGG   Nitrosomonas sp. AL212: NAL212_0876
Entry
NAL212_0876       CDS       T01443                                 
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
nit  Nitrosomonas sp. AL212
Brite
KEGG Orthology (KO) [BR:nit00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:nit03009]
    NAL212_0876
Enzymes [BR:nit01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     NAL212_0876
Ribosome biogenesis [BR:nit03009]
 Prokaryotic type
  ribosomal protein modification factors
   NAL212_0876
SSDB
Motif
Pfam: Radical_SAM UPF0004 TRAM_2 TRAM
Other DBs
NCBI-ProteinID: ADZ25803
UniProt: F9ZFA3
Position
769035..770414
AA seq 459 aa
MSAGKQFAQKVGFVSLGCPKALVDSEQILTQLRAEGYEISASYQDADLVVVNTCGFIDSA
VEESLDAIGEALAENGKVIVTGCLGAKEDGDVVKKAHPHVLAVTGPHALPEVMSAIHTHL
PQPHDPYTSLIPPQGIRLTPKHYAYVKISEGCNHRCTFCIIPSMRGGLVSRPIHQVMQEA
EHLVNAGVKELLIISQDTSAYGVDVKYRTGFWQGRPVKTRLTELAHALGSLGVWVRLHYV
YPYPHVDAIIPLMAEGKILPYLDVPFQHANPRILKMMKRPASAENNLARIQQWRNICPDI
TLRSTFIVGFPGETEAEFEDLLAFLQEAQLDRVGCFTYSPVAGATANQLSDHIPEAIKQE
RRARFMQQQEEISRQRLAAKVGHTMTVMIDELTGSQVIARSSADAPDIDGVVYVENAEHL
QPGELIDVQITGSNAHDLFAVMLNRDPSQQGGSLNSEMR
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgtcagcaggtaagcagtttgcacaaaaagttggttttgtctctttggggtgtcccaag
gccttggttgattcagaacaaatattgacccagttgcgggccgaaggttatgaaatatcg
gcttcataccaagatgcggacttggttgtggtcaatacctgcgggtttattgatagcgct
gttgaagagtcactggatgctattggtgaagctttggcagaaaatggtaaggtgatcgtg
acaggttgtctcggtgccaaggaagatggggacgtcgtcaaaaaagctcatccacatgtg
ctggcggttaccgggccgcatgcactgccagaagtcatgtccgcgattcatacgcatttg
ccacaacctcatgatccctatactagtctgataccgccgcaaggaatacggctaacaccg
aaacattatgcgtatgtgaaaatttctgaaggctgtaatcatcggtgtacgttttgtatc
attccgtccatgcggggcggtttggtaagccgcccgattcaccaagtgatgcaggaagcc
gaacatttagtgaatgccggagttaaagagctgttgattatttcacaggataccagcgcg
tacggtgttgatgtgaaataccgtaccggtttttggcagggaaggccggtgaaaacccgc
ctgactgaacttgcgcatgctttagggtcgttgggagtgtgggtgaggttgcattatgtt
tatccctatccgcatgtggatgcaattattccgcttatggctgaaggcaagatattgccc
tacttggacgtgccattccaacacgcaaatccgcgcattctcaaaatgatgaaacgaccc
gcaagcgccgagaataatttggctcgaattcaacaatggcggaatatttgccctgatatt
acattacgaagcacttttattgttggtttcccgggcgagactgaggctgaatttgaagat
cttctagcctttttacaggaagcgcaattagatcgtgtaggctgctttacgtactctccc
gttgcgggtgctactgccaatcagttgtctgaccacattcccgaagcaatcaaacaagag
cgtcgagcgcgtttcatgcagcagcaggaagaaatcagccgccaacgattggctgcgaaa
gtaggtcatacaatgacggttatgattgacgaattaactgggagtcaagtgattgcacgc
agtagtgcggatgcgccggatattgatggggtggtttatgtggaaaatgccgaacacttg
cagcccggtgagctcatcgacgtgcaaattactggatcaaatgcgcatgatttatttgct
gtcatgctaaatcgcgatccttcgcaacagggtggctctctgaattcagaaatgcgttaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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