KEGG   Nitrospira japonica: NSJP_1798
Entry
NSJP_1798         CDS       T05001                                 
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase and DNA-(Apurinic or apyrimidinic site) lyase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
nja  Nitrospira japonica
Pathway
nja03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:nja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NSJP_1798 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nja03400]
    NSJP_1798 (mutM)
Enzymes [BR:nja01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     NSJP_1798 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     NSJP_1798 (mutM)
DNA repair and recombination proteins [BR:nja03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     NSJP_1798 (mutM)
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco NFACT_N zf-FPG_IleRS PAS_11
Other DBs
NCBI-ProteinID: SLM47970
UniProt: A0A1W1I4P8
Position
I:1708624..1709508
AA seq 294 aa
MPELPEAEVVARQIRSRLTGARLIDAVLGRRDIVREGVGTLSWYRKTRLVSVERYGKSVA
LRFEKGTEARYVVAELGMTGLLLFDAVPIRHPRHVHAELIFEGSAERALRYWNPRRFGRL
SLLDASGLDRYISRRFGYDPLTVSREEFAGLLSHRRGRLKSLLMHQQTVAGIGNIYANEI
LFRAGLHPNALPNRLRPDRIDRLFRITREVLTQAIDCGGSSVRDFFAPDGTEGMYKRHHL
VYGKEGEPCPNRCGETIRRLQSERSSFICVSCQGRRGPARAFRTNEEAASIKHH
NT seq 885 nt   +upstreamnt  +downstreamnt
atgccggaactccctgaagcggaagtcgtcgccagacagatccggtctcgtttgaccggt
gcgagactgatcgatgcggtgctcggccgccgcgacatcgtgagggaaggggtgggcacc
ctgtcctggtaccgaaaaacgcgtctcgtttccgtcgaacggtacggcaagagtgtagcg
ctgaggtttgagaaaggcaccgaggcgcgatacgtggtggccgagctcggcatgaccggc
ctcctattgttcgacgctgttccgatcagacatccgcggcatgtccacgcagagttgatc
ttcgaaggaagcgccgagcgggcccttcgctattggaatccccgccgcttcggccgcctg
tcactcctcgatgcgtccgggctggaccgctatatctcccgccgtttcggctacgatcca
ttgacggtttcgcgcgaggagtttgccggtctcctgagccatcggcgaggccgtctaaaa
tcgttgttgatgcatcagcagacagtggccgggattggcaatatctatgcgaacgagatt
ttgttccgtgccggtctccatccgaatgccctgcccaatcgtctgcggcctgacagaatc
gatcggctcttccggattacccgggaagtgctcacgcaggcgatcgactgtggcggatcg
agcgttcgggattttttcgctccggacggcacggaaggcatgtacaaacgacaccatctg
gtctatgggaaagagggagagccttgtcccaaccgttgcggggagactattcggcgactc
cagagcgagcgaagctcgttcatctgtgtcagctgccaggggcggcgaggtccagcaagg
gcattccgcacgaacgaagaggcggcttccataaaacaccattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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