KEGG   Natrialba magadii: Nmag_0527
Entry
Nmag_0527         CDS       T01176                                 
Symbol
tfbA2
Name
(GenBank) transcription initiation factor TFB
  KO
K03124  transcription initiation factor TFIIB
Organism
nmg  Natrialba magadii
Pathway
nmg03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nmg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Nmag_0527 (tfbA2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nmg03021]
    Nmag_0527 (tfbA2)
Transcription machinery [BR:nmg03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     Nmag_0527 (tfbA2)
 Prokaryotic type
  Archaeal type
    TFB
     Nmag_0527 (tfbA2)
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_C OrfB_Zn_ribbon Sigma70_r4 DZR YopD zf-ribbon_3 RNA_POL_M_15KD DZR_2 DNA_ligase_ZBD Nudix_N_2 Trm112p Auto_anti-p27
Other DBs
NCBI-ProteinID: ADD04114
UniProt: D3SYK3
Position
complement(519511..520500)
AA seq 329 aa
MTDTNLRTYSSERTEERTETEQEETARSEEREQCPECGGRLISDDEHAETVCQDCGLVVE
EDEIDRGPEWRAFDAAEKDQKSRVGAPTTNMMHDQGLSTNIGWQDKDAYGKSLSSRQRQK
MQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALEEDLLPG
RSIEGVATSSLYAAARQAGTPRSLDEISAVSRVDKMELTRTYRYIIRELGLEVKPADPEH
YVPRFVSDLDLSDETERMARELLESARQEGVHSGKSPVGLAAAGVYAAALLTNEKVTQNE
VSEVASISEVTIRNRYKELLEASDTAAPA
NT seq 990 nt   +upstreamnt  +downstreamnt
atgactgatacaaaccttcgaacctactcgagcgagcgtaccgaggagcgaacggaaacc
gaacaggaggagacagcccgctccgaggagcgcgagcagtgcccggagtgtggtggtcgg
ctcatctcggacgacgaacacgcagagacggtctgtcaggactgtggtctggtcgtcgaa
gaggacgagatcgaccgcggccccgagtggcgcgccttcgacgccgccgagaaagaccag
aagtcccgcgtcggcgcaccaacgacaaacatgatgcacgaccagggcctgtcgacaaac
atcggctggcaggacaaggacgcctacggcaagtccctttccagccgccagcgccagaag
atgcagcgtcttcgcacctggaacgagcgcttccgcacccgcgactcgaaggagcgcaac
ctgaagcaggcactcggtgaaatcgaccggatggcctccgcgctcggactgccggagaac
gtccgcgaaaccgcgtcggtcatctaccgccgcgcactcgaggaggacctgcttccaggg
cggtccatcgagggcgtcgcgacgtcgtcgctgtacgctgcggcccggcaggccggcacg
ccgcgcagcctcgacgaaatctcggccgtcagccgtgtcgacaagatggagctcacccgc
acgtaccgctacatcatccgcgaactcggactcgaggtcaagcccgctgatccggaacac
tacgtcccccggttcgtcagcgacctcgacctctcggacgagaccgagcggatggcccgc
gaactactcgagtcggctcgccaggaaggcgtccacagcggcaagtcgccggtcggcctc
gccgcagcaggcgtctacgcggccgcactgctgaccaacgagaaggtgacccagaacgag
gtcagcgaggttgcaagcatctccgaggtcacgatccgaaaccgctacaaggagctgctc
gaagcctcggacaccgctgcaccggcctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (25)   

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