KEGG   Neisseria meningitidis M04-240196 (serogroup B): NMBM04240196_1768
Entry
NMBM04240196_1768 CDS       T01948                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
nmq  Neisseria meningitidis M04-240196 (serogroup B)
Pathway
nmq03030  DNA replication
nmq03430  Mismatch repair
nmq03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nmq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NMBM04240196_1768 (dnaE)
   03430 Mismatch repair
    NMBM04240196_1768 (dnaE)
   03440 Homologous recombination
    NMBM04240196_1768 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nmq03032]
    NMBM04240196_1768 (dnaE)
   03400 DNA repair and recombination proteins [BR:nmq03400]
    NMBM04240196_1768 (dnaE)
Enzymes [BR:nmq01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NMBM04240196_1768 (dnaE)
DNA replication proteins [BR:nmq03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NMBM04240196_1768 (dnaE)
DNA repair and recombination proteins [BR:nmq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NMBM04240196_1768 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DNA_pol_IIIA_C
Other DBs
NCBI-ProteinID: ADZ02196
Position
1902311..1905745
AA seq 1144 aa
MTEPTYIPLRLHTEFSITDGMVRIKKLVAKAQEYGLPALGISDLMNEFGLVKFYKACRGA
GIKPIGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLTAAYVGKDRNIHHAELNPE
WLENGDNSGLICLSGAHYGEVGVNLLNGNEDAARAAALKYAAWFPDAFYLELQRLPERPE
WEACVSGSVKLAEELGLPVVATHPTQFMSSDDFNAHEARVCIAGGWVLTDKKRPRDFTPG
QFFIPPETMLERFADLPEALENTVEIAKRCNLHITLGKNFLPLFPTPDGLSRDDYLIKLS
NKGLQERMVQLYPDEAERAAKMPEYQERLDFELNIIIQMKFPGYFLIVQDFINWAKTHGC
PVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPERVSMPDFDVDFCQANRGRVIE
YVRDKYGAQAVSQIVTFGTMSSKAVIRDVGRVLELPFMLCDKLSKLIPLEANKPLSLEKA
MEAEPQIQELIEVEEADELITLAKKLEDLTRGLGMHAGGVLIAPGKISDYSPVYQADESA
SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQNNIKNTTGDIIDVGKIPLDDQAAYQI
FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQ
YIHPLLEGILAPTYGIMVYQEQVMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIF
AEGAAKQGISREKSDEIFNYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM
SSELDNTDQLKHFYDDCRANGIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVE
SITAARQSGGKFTGLLDFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMD
NADQKAANANQGGLFDMMEDAIEPVRLIDLPRWSESEKLAEEKTVIGFYLSGHPFGPYAQ
EVRQIAPTKLDRLKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGGQTLE
NCADCLKADQVLIIESKVSRDDYGGGDGLRILANQVMTLQTARERYARSLSLALAPHHDI
GGLVRLLSSHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSV
RVNW
NT seq 3435 nt   +upstreamnt  +downstreamnt
atgaccgagccgacctacatccccttgcgcctgcataccgagttctcaattaccgacggt
atggtgcggattaaaaaactggttgccaaagcgcaggaatacggtttgcctgctttgggc
atcagcgatttgatgaacgaattcggcttggtgaaattctataaagcctgccgcggcgca
gggattaaacccatcggcgcggcggacgtgtggataggcaatccgaatgcgcccgacaag
ccgtttcgcgccatgctgattatccgcaacgatgcgggctatctgcgcttgagcgagctt
ctgacggcggcttatgtcggcaaagaccgcaatatccatcatgcggaactcaatcccgaa
tggctggaaaacggcgacaacagcggcttgatttgtttgagcggcgcacattacggcgaa
gtgggcgtgaatctgttgaacggcaatgaagacgcggcgcgtgcggcggcgttgaaatat
gcggcatggtttcccgatgcgttttatttagagctgcaacgcctgcccgaacgccccgaa
tgggaggcttgcgtttccggcagcgtgaagctggcggaggaactgggtttgccggtggtg
gcgacccacccgacgcagtttatgagcagcgatgatttcaacgcgcacgaggcacgggtg
tgtattgcgggcggctgggtgctgacggacaaaaaacgtccgcgcgatttcacaccgggc
cagtttttcattccgccggaaacgatgctggagcgtttcgccgatttgcccgaggccttg
gaaaacacggtagaaattgccaaacgctgcaatctgcacatcacattgggcaaaaacttc
ctgccccttttccccacgcccgacggtttatcgcgcgatgactatctcatcaaactctca
aacaagggcttgcaggaacgcatggttcagctttatcccgacgaggcggagcgtgcggca
aaaatgccggaatatcaggaacgtttggattttgagctgaacatcatcatccagatgaaa
ttccccggctatttccttatcgtacaagactttatcaactgggcgaaaacgcacggctgt
ccggtcgggccgggacgcggttcgggcgcgggttcgctggtggcgtattcgctgaaaatt
accgacctcgacccgctgaaatacgcgctgctgtttgaacgtttcttaaaccccgaacgc
gtctccatgcccgacttcgacgttgacttctgtcaggcaaaccgcggccgcgtgatcgaa
tatgtgcgcgataaatacggcgctcaggcggtcagccagattgttaccttcggcacgatg
tcgtccaaagcggtcatccgcgacgtggggcgcgtgttggagctgccgtttatgctgtgc
gacaaactgtccaagctgattccgttggaagccaacaaacctctgagtttggaaaaagcc
atggaggccgagccgcagattcaggaattgatcgaggtggaagaagcggacgaactgatt
acactggcgaaaaagctggaagatttgacgcgcggtctgggtatgcacgcgggcggcgtg
ttgattgcgccgggcaagatttccgattacagccccgtgtatcaggcggatgaatccgcc
tcgcccgtatccatgtacgacaagggtgacgtggaagacgtgggcttggtgaaattcgac
tttttgggtctgcgcaacctgaccattatcgaaatggcgcagaacaacatcaaaaacacc
accggcgacatcatcgatgtcggcaaaattcctctcgacgaccaagccgcctaccaaatc
ttccgagatgcgaacaccaccgccgtgttccagttcgagtcgaccggcatgaaaaaaatg
ctgaaaacggcgcacacgaccaagtttgaagaactgattgccttcgtatcgctctaccgc
cccggcccgatggacaacatccccgacttcgtcgcgcgtatgaaggggcaagaattccaa
tatatccatccgctgctcgagggcatcctcgcgccgacctacggcattatggtgtatcag
gaacaagtgatgcaggcggcacagattatcggcggctactcgctcggcggcgcggacttg
ctgcgccgcgcgatgggtaagaaaaagcccgaagaaatggtgaaacaccgcgaaatcttc
gccgaaggcgcggcaaaacaaggcatttcgcgcgaaaaatccgacgaaatcttcaactat
atggaaaaattcgccggctacggtttcaacaaatcccacgccgccgcctacgccctgatt
tcctaccagaccgcatggctcaaggcgcactaccccgccgaatttatggcggcgaccatg
tcgtccgaattggacaacaccgaccagctcaagcatttctacgacgactgccgcgccaac
ggcatcgagttcctgccgcccgacatcaacgaatccgactaccgctttacgccgtatccg
gacatgaaaatccgctacgcgctcggcgcgattaaaggcacgggcgaagccgccgtcgaa
tccatcaccgccgcgcggcaaagcggcggcaagtttaccggcctgttggacttctgcgag
cgcgtcggcaaagaacacatgaaccgccgcaccctcgaagccctgatacgcggcggcgcg
ttcgacagtatcgaacccaaccgcgccatgctcttggcgaacatcgacctcgctatggac
aacgccgaccaaaaagccgccaacgccaatcagggcgggctgttcgacatgatggaagac
gccatcgaaccggtgcggctcatcgacctgccgaggtggagcgaatcggaaaaactcgcc
gaagaaaaaaccgtcatcggcttttacctgtccggccacccgttcggcccgtatgcccaa
gaagtccgccaaatcgcaccgaccaaattagaccgtctgaagccgcaagacagcgtgcgc
ctcgccggattcgttaccgccgtacgcaccatgatgggcaagcgcggcaaaatcgccttc
gtcagccttgaagatttgagcggacaggttgaaatcatggtcggcggtcagacgttggaa
aactgcgccgactgcctcaaagccgaccaagtgctgattatcgaatccaaagtcagccgc
gacgactacggcggcggcgacgggctgcgtattctggcaaaccaagtcatgaccctgcaa
acggcacgcgaacgctacgcccgcagcctcagcctcgccctcgccccgcatcacgacatc
ggcggactggtacggctgctctcctcccaccaactgcccgacacgccgcgcatcccgctg
caactgtcgtatgccaacgaaaaagcgtcgggcaggcttcaagtgccgccgaaatggacg
gttacaccgagctccgcattgttcggcgaactggaaacattgctcggcagccggtcggtg
cgcgtcaactggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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