KEGG T01948: NMBM04240196

Neisseria meningitidis M04-240196 (serogroup B): NMBM04240196_1947

Entry

NMBM04240196_1947 CDS       T01948

Symbol

hrpA

Name

(GenBank) ATP-dependent RNA helicase HrpA

K03578

ATP-dependent RNA helicase HrpA [EC:5.6.2.6]

Organism

nmq Neisseria meningitidis M04-240196 (serogroup B)

Brite

KEGG Orthology (KO) [BR:nmq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nmq03019]
    NMBM04240196_1947 (hrpA)
Enzymes [BR:nmq01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     NMBM04240196_1947 (hrpA)
Messenger RNA biogenesis [BR:nmq03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     NMBM04240196_1947 (hrpA)

SSDB

Motif

Pfam:

DUF3418 OB_NTP_bind HA2_C

Other DBs

NCBI-ProteinID:

ADZ02368

Position

2105899..2109318

AA seq 1139 aa
MQNMKNQVRGSGMDARSNPANVSDGLQNSSGHIGTNTRYRLTKLGEQIARLPIDPKIARI
LLAAKKHDCMAEILVIASALSIQDPRERPLEARDASAKAHERFTDKQSDFLAYLNIWDSF
QRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAAFRRPPEVR
QLTSSENAGDQDLSAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMKSPD
GNDYTGARGSRFHLFPASALFKAKPKWVMAAELVETTRLYARDVAVIQPEWIEQEAPHLV
RYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVSYGKVAPEEAREIFIRSALVAQECD
LKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERLPEMAWKDAQGSVWGSED
SVRIIESDKAERSSENERNEFRKNKRNGSRQNENHGNTVGWVENPTSAATAKTVGFDNPT
YAAQQTTPSPVGEGRGEGKTVAAQTNFSATAANPLPNPLPQEREQSAAASTISDDLRPAN
LQQTAPSPVGEGWGEGKTVATQTNFSATSTNPLPQEREQSASASTFSDDLRPANLQQPSP
SPVGEGWGEGKTVATQTNFSATSTLSDDSKPKKQPAPQKNRLKPLPLADIRTFQAWLKTA
ERDNPRLLFLSRDDLMQHAAAHITEEQFPKFWQTADGKFKLSYRFEPHHPLDGVTMTVPL
TVLNRLHAPSLEWLVPGMIREKIQLQIKALPKQIRRICVPVPEFITQFLSQNPDRNAPIL
PQLAQAIAKTAGDIRIFEQINQDEWAAFRLPEHCYFNLRIIDDGGQELAGGRKLHELQQQ
LGQAAAVTFRDNTQEFERDNVTAWDIGTLPESIKFARGKQQLTGYLGLQKEKDGRIALRL
FDTTEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHINADTLRDDLTQAV
CDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYLQETAAVYAELNSKLGKHPLT
HLLRLRLQTLLAAGFATRTPWAQWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQELEQ
MWQEKTDSLIKQGLPISDGLAAFKWMIEELRVSLFAQELKTPYPVSVKRLLKEWEKIEK

NT seq 3420 nt +upstreamnt +downstreamnt
atgcaaaatatgaaaaaccaagtacgcggatcaggcatggatgcccgatccaatccggcc
aatgtttcagacggcctgcaaaacagttcgggtcatatcggtaccaacacgcgttaccgc
ctgaccaaactcggcgaacagatagcgcgcctacccatcgacccgaaaatcgcgcgcatt
ttgctggcggcgaagaaacacgactgcatggcggaaatattggtgattgcgtccgcgctg
tcgattcaagacccgcgcgagcggccgctagaagcgcgcgatgcctcagccaaggcgcac
gagcgttttaccgacaagcagtccgatttccttgcctatctgaacatttgggacagcttc
cagcgcgaacgcgataaaggcttgtccaacaagcagctggtgcagtggtgccgccaatat
ttcctgtcgcacctgcggatgcgcgagtggcgcgagctgcaccaccagcttgcccaaacc
gcgattgaaatgggtttaaccaccaaggaagccgctttcagacgacctcccgaagtcagg
cagctcacgtcgtctgaaaatgcgggtgaccaagacctatctgctaaactcaaacaaaaa
caactggataaaaagcaacaccgcgcccaaatccgcgccgccaaagaagcgggctacgaa
caaatccaccgcgccctgctcactggccttatcgccaacgtcggcatgaaatcgcccgac
ggtaacgactacaccggcgcgcgcggcagccgcttccaccttttccccgcctccgccctg
ttcaaagccaaacccaaatgggtgatggcggcagaattggttgaaaccacgcgcctttac
gcgcgcgacgtcgccgttatccagcccgaatggatagagcaggaagcgccgcacctcgtc
cgctatcattatttcgagccgcattgggaacaaaaacgcggcgaagtcgtcgccagcgaa
cgcgtgacgctttacggtctgaccgtattgccgcgccgccccgtgtcttacggcaaagtt
gcccccgaagaagcgcgcgaaatctttatccgcagcgcgttggtggcgcaggaatgcgat
ttgaaagcggatttttttgtccacaacaaaaagctgattaaagaaattaccgaactcgaa
cacaaatcgcgcaagcaagacgtgctggtcgatgacgaagccctgtttgcgttttataac
gaacgactgcccgaaatggcttggaaagacgcgcaaggcagcgtttggggaagtgaagat
tccgtacggattattgaatctgacaaagccgagaggtcgtctgaaaatgagcgcaacgag
tttcgtaaaaacaagcgtaatgggtctcgccaaaatgaaaatcacggcaacaccgtaggt
tgggttgaaaacccaacatcagccgcaactgcaaaaactgttgggtttgacaatccaacc
tacgctgcccaacaaaccaccccctcccccgtgggggagggtcggggagagggcaaaaca
gttgccgcacaaaccaacttttccgcaaccgcagcaaaccctctccctaaccctctcccg
caggagagggaacagagtgccgcagcttcaacgatttcagacgacctgcgtcctgcaaat
ctgcagcaaaccgccccctcccccgtgggggagggctggggagagggcaaaacagttgcc
acacaaaccaacttttccgcaacctcaacaaaccctctcccgcaggagagggaacagagt
gcctcagcttcaacgttttcagacgacctgcgtcctgcaaatctgcagcaaccctctccc
tcccccgtgggggagggctggggagagggcaaaacagttgccacccaaaccaacttttcc
gcaacctcaacactttcagacgactccaaacccaaaaagcagcctgcaccccaaaaaaac
cgtctgaaacccctacccctcgccgacatccgcaccttccaagcctggctcaaaaccgcc
gagcgcgacaatccgcgcctgctgttcctcagccgcgacgatctgatgcaacacgccgcc
gcacacattaccgaagaacagttccccaaattctggcaaaccgcagacggcaaattcaaa
ctttcctaccgcttcgagccgcaccatccgctagacggcgtgaccatgaccgtgccgctg
accgtcctcaaccgcctgcacgcgccgtcgctcgaatggctggtgcccggcatgatacgc
gaaaaaatccagttgcaaatcaaagcactgcccaagcaaatccgccgcatctgcgtgccc
gtgcccgaattcatcacccaatttttaagccaaaaccccgaccgcaacgcccccatcctg
ccccaactcgcccaagccatcgccaaaaccgcaggcgacatccgcatattcgagcaaatc
aaccaagacgaatgggccgcgttcaggctgcccgaacactgctatttcaacctccgcatt
atcgacgacggcggacaagagcttgccggcggccgcaaactgcacgaattgcaacaacaa
ctcggtcaagctgccgccgttaccttccgtgacaacacccaagaatttgagcgcgacaac
gtcaccgcatgggacatcggcaccctgcccgaatccatcaaattcgcacgcggcaaacaa
cagctcaccggctatctcggcctacaaaaagaaaaagacggccgcatcgccctgcgcctg
tttgataccacagaagccgcagagcaggcacaccgtcaaggtgtcatcgaattgatgaag
ctgcaattaaaagagcaggtaaaggatttgaacaaaggcatccaaggcttcacccaagct
gccatgctgctcaaacacatcaacgccgacactctgcgcgacgacctcacccaagccgtc
tgcgaccgcgcctttatcggcgaagacgagctgccgcgcaacgaaaaagccttcaaagaa
caaatcaaacgcgcccgcagccgcctgcccgccgtcaaagaagccctcagccgctacctg
caggaaaccgccgccgtctacgccgaactcaacagcaaactcggcaaacacccattgacc
caccttctaagactacgcctgcaaaccctgctcgccgccggcttcgccacccgaaccccg
tgggcacaatggccgcgcctccccatctacctcaaagccatgaccctgcgcctcgaaaaa
tacagcagcaaccccgcccgcgacgcagcccgcgaagccgatatccaagagctggaacaa
atgtggcaggaaaaaacagacagcctgattaaacaaggtctccccatttcagacggcctc
gccgcgtttaaatggatgattgaagaattgagggtgtcgctgttcgcgcaggaattgaag
acaccgtatccggtgtcggtgaagcggctgttgaaagagtgggaaaaaattgaaaaataa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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