KEGG   Nelumbo nucifera (sacred lotus): 104588556
Entry
104588556         CDS       T04131                                 
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
nnu  Nelumbo nucifera (sacred lotus)
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:nnu03016]
    104588556
Enzymes [BR:nnu01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     104588556
Transfer RNA biogenesis [BR:nnu03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    104588556
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM
Other DBs
NCBI-GeneID: 104588556
NCBI-ProteinID: XP_010244836
UniProt: A0A1U7YWH0
Position
Un
AA seq 627 aa
MEDIEDLLVGSGGAPPGFRLPLTAVGMKPRRNKPNNHASKEQNTKFQGLSPTSSPEVPGT
QTIYMKTFGCSHNQSDSEYMAGQLAAFGYVLSDNPEESDLWLINTCTVKSPSQSAMDTLI
IRCKNAKKPLVVAGCVPQGSRDLKELQGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKT
LPALDLPKVRKNEFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVERVRTVIADGV
KEIWLSSEDTGAYGRDIGVNLPILLNAIVAELPPDRSTMLRIGMTNPPFILEYLEEIANV
LSHPCVYSFLHVPVQSGSDSILTAMNREYTVSEFRIVVDTLMRLVPGMQIATDIICGFPG
ETDEDFSQTVGLINEYKFPQVHISQFYPRPGTPAARMKKVPSNIVKKRSRELTSIFESFT
PYQGMEGQVEKIWITEIATDGIHLVGHTKGYVQVLVNAPESMLGTSTNVKITSIGRWSVF
GEVIDTLDQIPDTTFSGIKSTVDKFHLCSDLYETCACSGQPEPCACAEQNCKEQNVVRKS
TNTRADKSLEEQKSRNPIGWLCRRRKVQRPECMVNGHAVKPIEKQVMRKRLGELGVIDWA
LLFGILVSFFTILALLLDLTFRMQSSK
NT seq 1884 nt   +upstreamnt  +downstreamnt
atggaagacatagaagatttgttagttggaagtggaggagctccacctggctttcgctta
ccattgacggccgtgggaatgaagcccaggaggaacaagcccaataaccatgccagcaaa
gagcagaacactaaatttcaaggcctctcacccacttcctcacctgaagtaccaggcacc
cagactatttacatgaaaacttttgggtgctcacataaccagagtgatagcgagtacatg
gctggtcagcttgcagcgtttggatatgtgttgagtgacaatcctgaggagtctgacctc
tggctgataaatacatgtactgtaaagtctcctagtcagtctgccatggatactttaatt
ataagatgtaagaatgcgaaaaagccattggtggtggctggatgtgtacctcaaggcagt
cgagatctaaaggaattacaaggagttagtatagttggagttcagcaaattgatcgtgtg
gttgaagttgtagaagagactctaaaaggtcatgaagtgcgacttttgaaccgcaagaca
ttgcctgcacttgaccttcctaaggtgagaaagaacgaatttattgagattcttcccatt
aatgttggttgtttaggtgcttgcacttattgcaagacaaagcatgctcgtgggcattta
ggtagttatactgtggacagccttgtagagcgtgtgcggactgttatagctgatggagtg
aaggaaatatggctaagcagtgaagatactggagcatatggtcgtgatattggggttaat
cttccaattttgcttaatgctattgttgcggaacttccccctgacaggagtacaatgctt
cgcattggaatgactaatcctccttttattcttgagtacttagaagagatagccaacgtt
ctgtctcatccgtgtgtatattcctttcttcatgtacctgttcaatctggaagtgactca
attctgactgcaatgaatcgggaatatactgtgagtgaattcagaattgttgtagatact
ttgatgcgacttgtacctgggatgcagattgctactgatattatttgtggatttcctggt
gaaactgatgaagatttttctcaaacagtcggccttattaacgagtacaagtttcctcaa
gttcatatttcacagttctatcccagacctggaacgcctgctgcaaggatgaagaaagtt
ccaagtaatatagttaagaaaaggagtcgtgaattgacttcaatctttgaatccttcaca
ccatatcagggaatggaaggtcaagtagagaaaatatggatcactgaaattgcaactgat
ggaattcacttggtgggtcataccaagggatatgtgcaggttcttgtaaatgctcctgaa
agcatgcttggaacatcaaccaacgtaaagataacatccattgggaggtggtcagtgttt
ggtgaagtgattgacactcttgaccaaataccagacactacattcagcggaataaaatcc
actgtggataaatttcatctttgctctgatctgtacgagacttgtgcatgctcaggacag
ccagagccatgtgcttgtgcagagcaaaactgcaaggagcaaaatgttgtgagaaaaagc
accaacacaagggctgacaagtcactggaagaacaaaagagtaggaacccaattgggtgg
ttatgtaggaggcgaaaggttcagaggccagaatgcatggtaaatggacatgctgtgaaa
cctatcgagaaacaagtgatgaggaaaagattgggtgagctgggtgttattgattgggct
ctactatttgggatacttgtgagcttttttacaattttagccttgcttttagatctgact
tttaggatgcagtcgtccaaatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (41)   

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