KEGG   Nelumbo nucifera (sacred lotus): 104604411
Entry
104604411         CDS       T04131                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104604411
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nnu01009]
    104604411
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nnu03019]
    104604411
   03036 Chromosome and associated proteins [BR:nnu03036]
    104604411
Protein phosphatases and associated proteins [BR:nnu01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     104604411
Messenger RNA biogenesis [BR:nnu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     104604411
Chromosome and associated proteins [BR:nnu03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     104604411
SSDB
Motif
Pfam: WD40 ComGF
Other DBs
NCBI-GeneID: 104604411
NCBI-ProteinID: XP_010267022
UniProt: A0A1U8AVN7
Position
Un
AA seq 514 aa
MNGGGDAEVASPAGPPQSLEWKFSQVFGERTAGEEVQEVDIISAIEFDKTGDHLATGDRG
GRVVLFERTDTRHHGFRRDLERMDNPISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINK
IRWCQTANSALFLLSTNDKTIKFWKVQEKKVKKICEMNVDPSRVGNGNVASSSVTAGVKP
YLANGVCPERSYNYLSNDFAFSPGGIPSLHLPVVVASHETSLVAKCRRIYAHAHDYHINS
ISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNML
AYSSSKGSIRLIDLRQSALCDNHTKLFEEQEAPGSRSFFTEIIASISDIKFGKNGRYILS
RDYMTLKLWDINMDAGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSY
SNLFRVFGVMSGSTEASTLEASKNPMRRQVQTPSRPSRSLSSLTRVVRRGADSPGVDTNG
NAFDFTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgaacggcgggggagacgcagaagttgcttctccggcggggccgccgcagtcgcttgag
tggaaattctctcaggtttttggggaacggacggctggggaagaagttcaggaagttgat
attatttcagcaattgagtttgataaaacaggagatcatcttgctactggtgatcgaggg
ggccgagttgtcttatttgaacggactgacacacggcatcatggatttcgaagggatctt
gagaggatggataatccaattagtaggcatccagagtttcggtacaaaacagaatttcaa
agccatgaacctgagtttgactatcttaagagcttggaaatagaggagaaaatcaacaag
atcagatggtgccagacagccaacagtgccctgtttcttctctccactaatgacaaaaca
attaagttttggaaggttcaagaaaagaaggtgaagaaaatatgtgagatgaatgtggac
ccctcgagggtgggaaatggtaatgttgccagttcaagtgtaacagctggtgtgaaacca
tatcttgcaaatggagtatgtccagagagatcgtacaattatttgagcaatgactttgca
ttttcaccgggaggcattccgtcattacatttacctgtggtagtagcaagccatgagaca
agccttgtggctaaatgtcgaagaatatatgctcatgctcatgactatcacataaattcc
atttcaaataacagtgatggtgagactttcatatctgctgatgatctgcgaataaatctt
tggaacttggaaataagcaaccaaagtttcaatattgttgatgtgaagcctgcaaacatg
gaggatctaactgaggttataacatcagctgagttccacccaacacattgtaatatgtta
gcatacagtagctcaaagggttcaatccgtcttattgatttgcggcaatccgctttatgt
gataatcatacaaaattgtttgaggagcaggaggcacctggttcaagatccttcttcaca
gagatcattgcctcaatctcagatattaaatttggaaagaatggcagatacatacttagc
cgtgattacatgactcttaagctatgggacataaatatggatgccggtccagttgcaact
ttccaggttcatgaatatttaaggcctaagctatgtgatttatatgaaaatgattcaata
tttgataagtttgagtgttgtctgagtggagatggtcttcgagttgcaactggctcatac
agcaatctatttcgtgtatttggtgttatgtcgggtagcaccgaggcatcaactttggaa
gctagcaaaaatcccatgaggagacaagtacagaccccttcacggccttctagatccctg
agcagtcttacacgtgtagtcaggagaggtgcagatagtcctggagttgatacaaatgga
aatgcttttgatttcacgacaaaactactccatctagcatggcatccaacagaaaattct
attgcctgtgctgctgcaaacagcctgtacatgtattatgcgtaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (28)   

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