KEGG   Nelumbo nucifera (sacred lotus): 104611161
Entry
104611161         CDS       T04131                                 
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    104611161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:nnu03000]
    104611161
   03021 Transcription machinery [BR:nnu03021]
    104611161
Transcription factors [BR:nnu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    104611161
Transcription machinery [BR:nnu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     104611161
  RNA polymerase III system
    TFIIIB
     104611161
  RNA polymerase I system
    SL1/TIF-1B
     104611161
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 104611161
NCBI-ProteinID: XP_010276406
UniProt: A0A1U8BIA3
Position
Un
AA seq 200 aa
MADQVLEGSQPVDLTKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq 603 nt   +upstreamnt  +downstreamnt
atggccgatcaagtcttggaagggagccaacctgtagatcttaccaagcatccctcaggc
attgttcctacgctacagaacattgtatcgactgtcaacttggattgcaagctggatctt
aaggccattgcactacaagctcgtaatgcagaatataatcccaagcgttttgctgctgtt
ataatgaggataagagaacctaagactacagcattgatctttgcatctggaaagatggtc
tgtactggagccaagagtgaacaacagtcaaaactggctgcaaggaagtatgctcgaatc
attcagaagcttggttttccagcaaagtttaaggacttcaagattcagaacatagttggc
tcatgtgatgtgaaatttccaatcaggcttgaaggacttgcatattctcatggtgccttt
tcaagttatgaaccggaactgttcccaggcctgatctataggatgaaacaaccaaagatt
gtccttcttatctttgtgtctgggaagatagttctgacaggagctaaggtgagagatgaa
acatataccgcttttgagaacatttatccggttctaacagaattcaggaaaaaccagcaa
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (19)   

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