KEGG   Actinomadura parvosata subsp. kistnae: BKM31_52165
Entry
BKM31_52165       CDS       T04759                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
noa  Actinomadura parvosata subsp. kistnae
Pathway
noa03420  Nucleotide excision repair
noa03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:noa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BKM31_52165
   03430 Mismatch repair
    BKM31_52165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:noa03400]
    BKM31_52165
Enzymes [BR:noa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BKM31_52165
DNA repair and recombination proteins [BR:noa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BKM31_52165
   MMR (mismatch excision repair)
    Other MMR factors
     BKM31_52165
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 AAA_30
Other DBs
NCBI-ProteinID: AQZ68901
UniProt: A0A1V0AF96
Position
11550362..11553643
AA seq 1093 aa
MLTPAELAGKLGILPPTPEQATVIEAPLEPMVVMAGAGSGKSETMAGRVVWLVANGLVKP
ENVLGLTFTRKAAAELATRVRERLNGLAEAGLVEPGALDNEPTVSTYHAYAARLVTDHAL
REGLEPTMRLVTPAVSWQLASRVVAMYDGPMDKIELGPPSVTAALLELAGELSEHLRSPA
DVRRVGEWLRERHAVLPGRTTLAQRKPLSVQAAREQLLPLVERYERLKRAREVIDYGDQM
SLAARIAANHKEVGEIERGRYSVVLLDEYQDTSHAQLVLLRSLYGGGHPVTAVGDPCQSI
YGWRGASAGNLRRFPQDFRTAAGDPAPVRQLSVSFRNGDRVLDVAARVQLPLRMEAREVP
VLVPGPNRVDRGRVTCAFHETAADEAKWIADGIARLLGQETAPDGLPWGEKERKKTLALQ
PQDVAILARKRSQFPAIRRALEERDIPVEVVGLGGLLTVPEVSDIVATLRVLYDATAGDA
LARLLAGPRWRIGPADLRVLGEHARTLARELSESHREDDPLDQVVADLAEERGSLVDALD
ELPDREEWLESFSPLARTRLVALAHELRHLRAHTAQPLPDLISEVERRLGLDIEVAARSG
TVGAFAARADLDAFLDAASRFAGDAEDPTLGAFLAYLQAAESEEFGLEAGRVGESNSVKL
MTVHASKGLEWPVVVVPGLSQLVSSKGTIATGSIFPATPVMNSRWTENPRKLPYALRGDA
ADLPRLGGLSKEELAAFDEHCRERDLMEERRLAYVAVTRAHYHLIASGYRWGSATKPLEP
SDFLLEIRDTADRISVWADDLEEGATNPLLAEPAEATWPVEPEGLRYESVLDGARLVEDA
LAGTLGPYEDEPIKAYEEERLRAWQRDTDLLLRERELHRRRPATTVELPTKLTVSALVTL
AADPRELARRIRRPVPVKPAPLARRGTSFHKWLETRWDQQRLIDDLELYDEELEEADVRL
AELQERFEQSEWADRRPVDLEVPFETMIADRLVRGRMDAVFERAGGGYEVVDWKTGQPPR
GKKAAKAASVQLAAYRLAWSHLAEVPLEQVGAAFHYVRANRTVRPVDLLDADGLVALIEG
VRLVDDERPASGA
NT seq 3282 nt   +upstreamnt  +downstreamnt
gtgctgacccccgccgaactcgccggcaagctcggcatcctcccgcccacccctgagcag
gcgacggtcatcgaggccccgctggagccgatggtggtcatggcgggcgccggctcgggc
aagagcgagaccatggcgggccgcgtggtctggctggtggccaacggcctggtcaagccg
gagaacgtgctgggcctgacgttcacccgcaaggccgccgccgagctggccaccagggtg
agggagcggctcaacggcctggccgaggcggggctggtcgagccgggcgcgctcgacaac
gagccgaccgtgtccacctaccacgcctacgccgcccgcctggtcaccgaccacgcgctg
cgcgagggcctggagcccacgatgcgcctggtcacgcccgccgtgtcgtggcagctcgcc
tcgcgggtggtggcgatgtacgacgggccgatggacaagatcgagctgggcccgccctcg
gtcacggccgcgctgctggagctggccggcgagctgtcggagcacctgcgctcgcccgcc
gacgtgcggcgggtgggggagtggctgcgggagcggcacgccgtgctgcccggccgcacc
acgctggcccagcgcaagccgctgagcgtgcaggcggccagggagcagcttctccccctc
gtggagcgctacgaacggctcaagcgcgcccgcgaggtcatcgactacggcgaccagatg
tcgctggccgcccgcatcgccgccaaccacaaggaggtcggcgagatcgagcggggccgc
tactccgtggtcctgctcgacgagtaccaggacaccagccacgcccagctcgtcctgctg
cgctcgctctacggcggcggccatccggtcaccgccgtgggcgacccgtgccagtcgatc
tacggctggcgcggcgcgtcggcgggcaacctgcgccgcttccctcaagacttccgcacg
gccgccggcgacccggccccggtccgccagctcagcgtcagcttccgcaacggcgaccgg
gtgctcgacgtcgccgcccgcgtccagctgccgctgcgcatggaggcccgcgaggtgccc
gtgctggtccccggcccgaaccgggtcgatcgcggccgcgtcacctgcgccttccacgag
accgccgccgacgaggcgaagtggatcgccgacggcatcgccaggctgctcggccaggag
acggcccccgacggcctgccgtggggcgagaaggagcgcaagaagacgctcgccctgcaa
ccccaggacgtcgccatcctggcccgcaagcgctcgcagttccccgcgatccgcagggcg
ctggaggagcgggacatcccggtcgaggtggtcggcctgggcggcctgctgaccgtgccc
gaggtgagcgacatcgtggccaccctgcgcgtcctgtacgacgccacggcgggcgacgcg
ctggccaggctgctggccgggccccgctggcggatcggtccggccgacctgcgggtgctg
ggcgagcacgcccgtaccctcgccagggagctgagcgagagccaccgcgaggacgacccg
ctcgaccaggtggtggccgacctggccgaggagcgcggcagcctggtcgacgccctcgac
gagctgcccgacagggaggagtggctggagtcgttctcgccgctggcccgcacgaggctg
gtggcgctcgcgcacgagctgcgccacctgcgcgcgcacaccgcgcagccgctgcccgac
ctgatcagcgaggtcgagcgcaggctcggcctcgacatcgaggtggcggcgcgcagcggc
acggtcggcgcgttcgcggcgcgggccgacctcgacgcgttcctcgacgcggcctcccgc
ttcgccggcgacgccgaggatcccacgctgggggcgttcctcgcctacctccaggcggcc
gagagcgaggagttcggcctggaggccggccgggtcggcgagagcaacagcgtcaagctg
atgaccgtgcacgcctccaagggcctggagtggcccgtcgtggtcgtgccgggcctgtcg
cagctcgtcagctcgaagggcacgatcgcgaccggcagcatcttccccgccacgccggtg
atgaacagccgctggacggagaacccgcgcaagctcccctacgcgctgcgcggcgacgcg
gccgacctgccccggctgggcgggctgagcaaggaggagctggccgcgttcgacgagcac
tgccgcgagcgcgacctcatggaggagcgcaggctcgcctacgtggccgtgacccgcgcc
cactaccacctgatcgcctccggctaccggtggggcagcgcgaccaagccgctggagccg
tccgacttcctgctggagatccgcgacaccgccgaccgtatctccgtgtgggccgacgat
ctcgaagagggcgccaccaacccgctgctggccgagcccgccgaggccacctggccggtc
gagcccgaggggctgcgctacgagtccgtgctcgacggcgcccggctcgtcgaggacgcg
ctggcgggcacgctggggccgtacgaggacgagccgatcaaggcgtacgaggaggagcgg
ctgcgggcctggcagcgcgacaccgacctgctgctgcgcgagcgggagctgcaccggcgc
aggcccgccaccacggtcgagctgccgacgaagctgaccgtgtccgcgctggtcacgctg
gccgccgacccgcgcgagctggcccgcaggatccgccggccggtcccggtcaagcccgcg
ccgctggcccgccgcggcacctccttccacaagtggctggagacgcgctgggaccagcag
cggctcatcgacgatctggagctgtacgacgaggagctcgaagaggccgacgtgcggctg
gcggagctgcaggagcgcttcgagcagagcgagtgggccgaccggcggccggtcgacctg
gaggtcccgttcgagaccatgatcgccgaccggctggtgcgcgggcgcatggacgccgtg
ttcgagcgggccggcggcggctacgaggtcgtcgactggaagaccgggcagccgccgcgg
ggcaagaaggccgccaaggccgcctccgtgcagctcgccgcgtaccggctggcctggtcg
cacctggcggaggtgccgctggagcaggtcggcgcggccttccactacgtgcgcgccaac
cgcaccgtacgcccggtggacctgctcgacgccgacggcctcgtggcgctgatcgagggc
gtcaggctcgtagatgatgaaaggccggcttcgggtgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (40)   

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