KEGG   Nostoc sp. PCC 7107: Nos7107_5136
Entry
Nos7107_5136      CDS       T02362                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
nos  Nostoc sp. PCC 7107
Pathway
nos03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nos00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Nos7107_5136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nos03019]
    Nos7107_5136
Enzymes [BR:nos01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     Nos7107_5136
Messenger RNA biogenesis [BR:nos03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Nos7107_5136
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 ERCC3_RAD25_C P-loop_SecA Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: AFY45650
UniProt: K9QJ27
Position
5988691..5990121
AA seq 476 aa
MQNCGIRSQSLRTAHPTLQMCVRLRLMPPAATGRCYLRSSMSFSHLGLSNEIIRAVTELG
YTKPTPIQMQAIPAVLSGRDLLAGAQTGTGKTASFTLPLLQKLSSEKSLKSTSYECFPIR
ALILTPTRELAAQVELNVREYSKYLKLNTMAMFGGVSINPQKKLLRGRVDILVATPGRLL
DHVQQRTVNLSNVEFLVLDEADRMLDMGFIRDIRRILSLLPKQRQNLLFFATFSDKIKEL
ATGLLDNPEMIEVARRNVTADTVTQKVYKVDRDRKCQLLVQLIRQNNWYQVLVFTRTKYG
ADRLVKQLTQERIQALAIHGNKSQSARTHALAKFKNDSLQVLVATDIAARGLDISELPHV
VNFDLPNVPEDYVHRIGRTGRAGASGKAVSLVCADEYDLLADIETLIKQRLPFEVVTGFG
ANSQIKPEPITDERKHRPKGKKRPDRSSTKPTSQKSPRQTVKGAKKSDDRPDTSHR
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgcagaactgcggcattcgctctcagtctttgcgtactgcccatcccacccttcaaatg
tgcgtccgcctaagactgatgccgccagcggcgacaggccgatgttatttacggagttct
atgtctttttctcatctcggcttgtctaatgaaatcatccgtgctgtcaccgagctagga
tacaccaaacccacgcctattcagatgcaggcgattcctgccgttttgtcagggcgtgat
ttgttagctggggcgcaaacggggactggaaaaactgccagcttcactctgccgctgctg
caaaaattgtcgtctgaaaagagccttaaaagcacatcttatgaatgtttcccaattcgg
gcgctaattctcactccgactcgtgaattagccgcccaagtagagctaaatgtgcgtgag
tatagcaagtacctgaagttgaacacgatggcgatgtttggcggggtcagcattaatcca
caaaaaaagctgttgagaggtcgagtggatattctggtcgctacgccagggcgactgcta
gaccatgtacagcagcggacggtgaacctgtcaaatgttgagtttttagtcctggatgaa
gcagaccggatgttggatatgggttttatccgtgatatccgtcgcattctctcgctttta
ccaaaacagagacaaaacttattattcttcgctaccttctcggacaaaatcaaggaacta
gctaccgggttgctagataacccagagatgatcgaggtagcacgccgtaacgttactgcc
gacactgtgacacaaaaagtctacaaggtagatcgcgatcgcaagtgccaattacttgtt
cagctgattcggcaaaataactggtatcaagtgctagtgttcacgcggacaaagtatggt
gctgaccgtctggtgaagcagttgacccaagaacgtattcaagcactggctattcacggt
aataaaagtcaatcggcacgtacccacgctttggctaaattcaaaaacgacagtttacag
gtattggtcgcaacagacattgctgcacgtggtctcgacatcagcgaactccctcatgtg
gtcaatttcgatttacccaatgttccagaagattatgttcatcgcattggtcgcactggt
cgcgcgggtgcatcaggtaaagctgtatcgctggtgtgtgccgatgaatatgatctgttg
gcagatatcgaaacgctaattaaacaacgattgccttttgaagtggttactggttttggt
gctaattcacaaatcaagcccgaaccaattaccgatgaacgcaagcatagacccaaaggc
aaaaagcgtcccgatcgctctagtactaaacccacatcacaaaaatcgcctcggcaaacg
gtgaaaggtgctaaaaaatctgatgatcgtcctgacacatcacaccgttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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