KEGG   Natronococcus occultus: Natoc_1832
Entry
Natoc_1832        CDS       T02426                                 
Name
(GenBank) AAA family ATPase, CDC48 subfamily
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
nou  Natronococcus occultus
Brite
KEGG Orthology (KO) [BR:nou00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nou03019]
    Natoc_1832
   03009 Ribosome biogenesis [BR:nou03009]
    Natoc_1832
   04131 Membrane trafficking [BR:nou04131]
    Natoc_1832
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nou04147]
    Natoc_1832
Messenger RNA biogenesis [BR:nou03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     Natoc_1832
Ribosome biogenesis [BR:nou03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    Natoc_1832
Membrane trafficking [BR:nou04131]
 SNARE
  SNARE associated proteins
   Others
    Natoc_1832
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    Natoc_1832
Exosome [BR:nou04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Natoc_1832
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N CDC48_2 RuvB_N AAA_16 AAA_2 TIP49 AAA_5 AAA_33 AAA_14 AAA_22 RNA_helicase nSTAND3 AAA_7 AAA_28 Mg_chelatase AAA_3 IstB_IS21 DUF815 AAA_25 Sigma54_activat NB-ARC AAA_18 ABC_tran Zeta_toxin TsaE Parvo_NS1 AAA_17 ATPase AAA_11 ATPase_2 AAA_30 AAA_24 PhoH SLFN-g3_helicase bpMoxR AAA_19 Vps4_C Bac_DnaA ATP-synt_ab Zot HJURP_C
Other DBs
NCBI-ProteinID: AGB37627
UniProt: L0JX53
Position
complement(1767107..1769368)
AA seq 753 aa
MKLTVKPLKQKDAGRGLAAIDRVSMRELDLENGDYIVIEGKGDSQAVARVWPGYPEDEGR
GIVRIDGRLRQEADVGIDDSVDIEPADVQPANSVTVALPQNLRIRGDIGPLVRDKLSGQA
VTEGQTVPFSLSFGPMASSGQSVPLKIASADPSGTVVITDSTNIEISETPAEQVSTDADG
SPEGVPNITYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKTL
MAKAVANEIDAHFETISGPEIMSKYYGESEEQLREVFEDAEENAPAIIFIDELDSIAAKR
EEAGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRVDAIDPALRRGGRFDREIEIGVPD
KGGRKEILQVHTRGMPLSEDVDLEHYAENTHGFVGADLESLAREGAMNALRRIRPDLDLE
SDEIDAEILESLEVTEGDVKEALKGIQPSAMREVFVEVPDITWEDVGGLGDTKERLRETI
QWPLDYPEVFEQMDMQAAKGVLMYGPPGTGKTLLAKAVANESQSNFISIKGPELLNKYVG
ESEKGVREVFEKARSNAPTVIFFDEIDSIAGERGQRQGDSGVGERVVSQLLTELDGLEEL
EDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEEGRRKIFEVHTRDKPLADAVDLDW
LAGETEGYVGADIEAVCREASMAASREFINSVDPDDMPDTIENVRISKEHFERALEEVQP
SVTPETRERYEEIEQEFQTAEPESEDQLGRTFQ
NT seq 2262 nt   +upstreamnt  +downstreamnt
atgaaactcaccgtcaaacccctgaaacagaaggacgcgggccgcgggctcgccgcgatc
gaccgcgtctcgatgcgcgagctcgacctcgagaacggcgactacatcgtcatcgagggc
aagggcgatagccaggccgtcgcgcgcgtctggcccggctacccggaggacgagggccgc
ggcatcgttcggatcgacggccgtctgcgccaggaggccgacgtcgggatcgacgacagc
gtcgatatcgagccggccgacgtccagcccgcgaactcggttacggtcgcgctcccgcag
aacctccgcattcgcggcgacatcggcccgcttgtgcgcgacaagctgtccggccaggcg
gtcaccgaggggcagacggtgccgttctcgctctcgttcggtccgatggcaagctcgggg
cagtcggtgccactgaagatcgcgagcgccgatccgtccggaacggtcgtcatcacggac
tcgacgaacatcgagatctccgagacgccggccgagcaggttagcaccgacgccgacggc
tcgcccgagggcgtgccaaacatcacctacgaggacatcggcggtctggacgacgagctc
gatcaggttcgcgagatgatcgagctgccgatgcgccaccccgagctgttccagcagctc
ggcatcgaaccgcccaagggcgtgctcctgcacggcccgccgggcaccggaaagaccctg
atggccaaggctgtcgccaacgagatcgacgcccacttcgagacgatctccggcccggag
atcatgtcgaagtactacggcgagagcgaagagcagctccgcgaggtgttcgaggacgcc
gaggagaacgcgcccgcgatcatcttcatcgacgagctcgactccatcgccgccaaacgc
gaggaggccggcggcgacgtcgaacgccgcgtggtcgcgcaactgctcagcctgatggac
ggcctcgaggaacggggccgggtcaccgtcatcgccgcgaccaaccgcgtcgacgcgatc
gaccccgcgctgcgacggggcgggcgcttcgaccgcgagatcgagatcggcgtccccgac
aagggcggccgcaaggagatcctgcaggtccacacccgcgggatgcccctgtccgaggac
gtcgacctcgagcactacgccgagaacacccacggcttcgtcggcgccgacctcgagagt
ctcgcccgcgagggcgcgatgaacgccctgcgccggatccgtcccgatctcgacctggaa
tccgacgagatcgacgccgagatcctcgagtccctcgaggtgaccgagggcgacgtcaag
gaggcgctcaaggggatccagccctcggcgatgcgggaggtcttcgtcgaggttcccgac
atcacctgggaggatgtcggcgggcttggcgacaccaaagagcgcctgcgcgagacgatc
cagtggccgcttgactaccccgaggtcttcgagcagatggacatgcaggccgccaagggc
gtcctcatgtacggcccgcccggcaccgggaagacgctgctggccaaagccgtcgcgaac
gagtcccagtcgaacttcatctcgatcaaggggcccgaactcttgaacaagtacgtcggt
gagtccgagaagggagttcgggaggtcttcgagaaggcccgctcgaacgccccgaccgtg
atcttcttcgacgagatcgactcgatcgcgggcgaacgcgggcagcgacagggcgattcg
ggcgtcggtgaacgcgtcgtcagccagctgctgaccgagctcgacggcctcgaggaactc
gaggacgtcgtcgtgatcgcgacgaccaaccgcccggatctgatcgactcggcgctgctc
cgtccgggccggctcgatcgccacgtccacgtgccggttcccgacgaggagggccgcagg
aagatcttcgaggtccacacccgcgacaagcctctggccgacgcggtcgatctcgactgg
ctcgcgggcgagaccgagggctacgtcggcgccgacatcgaggccgtctgtcgcgaggcc
tcgatggccgccagccgcgagttcatcaactcggtcgaccccgacgatatgcccgacacc
atcgagaacgtccgcatcagcaaggaacacttcgagcgcgctctcgaggaggtccagccg
agcgtgactcccgagacccgcgagcgctacgaggagatcgaacaggagttccagaccgcc
gaaccggaaagcgaggaccagctcggccgcaccttccagtga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (43)   
   Pfam (43)   
All databases (59)   

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