KEGG   Neofusicoccum parvum: UCRNP2_1323
Entry
UCRNP2_1323       CDS       T03126                                 
Name
(GenBank) putative pre-mrna splicing protein
  KO
K12854  pre-mRNA-splicing helicase BRR2 [EC:5.6.2.6]
Organism
npa  Neofusicoccum parvum
Pathway
npa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:npa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    UCRNP2_1323
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:npa03041]
    UCRNP2_1323
Enzymes [BR:npa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     UCRNP2_1323
Spliceosome [BR:npa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    UCRNP2_1323
 Complex C
   U5 SnRNP specific factors
    UCRNP2_1323
SSDB
Motif
Pfam: Sec63 DEAD Helicase_PWI ResIII BRR2_plug Helicase_C AAA_22
Other DBs
NCBI-ProteinID: EOD51861
UniProt: R1GUA0
Position
Unknown
AA seq 2224 aa
MAQDPNRLAQFKYAAMSNLVLQADRRFVTRRGDDATGDPESLAGRISIKEMGGRVARDSA
PTEKKKKKKQTGLGDIERGDIHEGEDVLERERKKQKRGEPQQLRGTGILSQADLLVEDLR
YRPRTPATRATYELITTIVGRHLGDVPNHVVRSAADAVLEYLKDENLKDFDRKKEVDDIL
GSTMGSKEFNELVNLGKKITDYDAQDDDEEMSDAADGAAGAELDEKQGVAVVFDEDDEDD
EEAGQTFEVRDEDDTSDEEEGDFAERQGAEGATAAGGGILAEEDDDKLGDEEEMIIDSGM
DGSAAKKKGADRPIPAHEIDAYWLQRQIGQIYEDAHIQQEKTQEALQILSGETEDDEEKP
LREIENDLMELFDWEHHELVAKLVLNRDKVVWVTRWRRVEEDPNARGAIEREMIAAGHKK
ILNELRTREDAAADGPASKKMKVDLMDIDVPKAEEKADAGKETGLVGGLQPRRLINLENL
VFEQGNHLMTNPNVKLPQGSTKRTFKGYEEIHVPAPKPKRDPNDPPDMPVTELPEWARVG
FGSSKNLNRIQTRCYPTAFNDDGNMLICAPTGSGKTNVAMLTMLREIGKHRNPETGEINL
DEFKIIYIAPLKALVQEQVGNFGKRLEPYGIKVSELTGDRQLTKQQIADTQVIVTTPEKW
DVITRKATDTSYTNLVRLICIDEIHLLHDDRGPVLESIVSRTIRRMEQTGDPVRIIGLSA
TLPNYRDVASFLRVDPIKGLFHFDGTFRPCPLKQEFIGVTDKKAIKQLKTMNDVCYTKVL
EQVGQNDNQMLIFVHSRKETAKTAKYIRDKALELETIGQIIRSDAASREILRTESEGVQN
ADLKDVMPYGFGIHHAGMSRADRTSVEDLFADGSLRVLVCTATLAWGVNLPAHTVIIKGT
QIYSPEKGSWVELSPQDVLQMLGRAGRPQYDTYGEGIIITTQSEMQYYLSLMNQQLPIES
QFMSRLADNLNAEVVLGNVRSRDEGVEWLGYTYLYVRMLRSPGLYSVGAEYEDDEALEQK
RVDLIHSAATVLEKSNLVKYDKKSGKLQGTELGRVASHYYITHNSMATYNMHIQPSISTI
ELFRVFALSDEFKYIPVRQDEKLELAKLLGRVPIPVKESIEEPHAKINVLLQAYISRLKL
EGLALMADLVYVTQSAGRILRAIFEICLKKGWAHVAKTALDLCKMAEKRMWPTMTPLRQF
PNCPRDIVQKAERIDVPWSSYFDLDPPRMGELMGLPRAGRTVCGLVEKFPRLEIQAHVQP
MTRSMLRMELTITPNFIWDEFLHGNAESFWIIVEDCDGEEILFHDQFLLRREYATNEMNE
HLVEFTVPITEPMPPHYFITVVSDRWMHSETKIAVSFQKLILPEKFPPHTQLLDLQPLPV
AALKRQDFTDLYPNWERFNKVQTQTFQALFQQDENVLVGASTGMGKTVCAEFALLRHWAK
QEGGKAVYVAPFQELVDNRYKDWKQRLANVAGGKEIVKLVGDTTSDLQLLQQGDVILATP
QQWDVISRQWQRRKNVQAVKLFIADDLHMLGGQGGYVYETIVSRMHAMTLQLESEMRIVG
LSVSLSNARDVGEWIGATKHTIFNFSPHVRAVPLELHIQSFTIPHFPSLMLAMAKPAYQA
VLQLSPDKPAMIFVPSRKQVRNTALDLAANCVADDDEDRFLHASIEEMRPVLEKINEPAL
AESLSHGIGYFHEALSAFDKRAVEHFFRVGAIQVLLVSRDCCWEINVNAHLVVVMNTQFF
EGREHRYIDYPISEILQMFGKAGRPGQEKLSRGVLMVPAVKRDYYKKFLNEALPIESHLQ
VFLHDAFVAEISTRMISSTQDAVDWSTYTYFYRRLLANPSYYGLTDTSHEGLSAHLSELV
ETTLKDLVEAKIIELDEEDDSITPLNPAMIAAYYNISFITMQTFLLSLNGRTKLKGILEI
ITSATEFEGIQIRRHEDHVLRRVYDRLPVKMAEASYESPHFKAFVLLQAHFARMQLPVDL
AKDQDTILKKVLPLLSACVDVLSSEGHLNAMNAMEISQMVVQAMWDRDSPLKQIPHFDNR
LVQEANTAGVQDISDFIDAMDPEAPNHKDLTDRLKLSGPQLADAARFVNDYYPDLSVEFN
VLEPEDIAAGSPAYLDVTVTREIDEDDSPQTTVHAPFFPADKTENWWLVVGEESTKSLLA
IKRVTVQRELRTKLEYVVPTAGEHELTLYLMSDSYMGVDQAPTFKVTAAEGMEESEEEDE
EDEE
NT seq 6675 nt   +upstreamnt  +downstreamnt
atggcgcaggacccgaacaggctcgcgcagttcaagtatgcggccatgtccaacctggtc
ctccaggcggaccggcgcttcgtgacgcgccgaggcgacgacgccacgggcgacccggag
tcgctggcgggccgcatcagcatcaaggagatgggcgggcgcgtggcccgggacagcgcg
ccgacggagaagaagaaaaagaaaaagcagacgggcctgggggacatcgagcgcggcgac
atccacgagggcgaggacgtgctggagcgcgagcggaagaagcagaagcgcggcgagccg
cagcagctgcgcggcaccggcatcctgagccaggccgacctgctcgtcgaggacctgcgc
taccggccccgcaccccggccaccagggccacgtacgagctcatcacgacgatcgtgggc
cgccacctgggcgacgtgccgaaccacgtcgtgcgcagcgcggcggacgcggtgctggag
tacctgaaggatgagaatctcaaggacttcgaccggaagaaggaggtcgatgatatcctg
ggctcgaccatgggctcgaaggaattcaacgagctcgtcaacctgggcaagaagatcacc
gactacgacgcgcaggatgacgacgaggaaatgagtgacgcggcggacggcgctgccggc
gcggagctcgacgagaagcagggtgtcgcggtcgtcttcgacgaggacgacgaggacgac
gaggaggctggccagacattcgaggtcagagacgaggatgacacatcggatgaagaggag
ggcgattttgccgagcggcaaggcgctgagggtgccacagctgctggcggcggtattctg
gccgaggaggacgacgacaagctgggagacgaggaggagatgatcatcgactcgggaatg
gacggctctgcggcgaagaagaagggcgcagacaggccaatccccgcacacgaaatcgac
gcctactggttacaacgtcagatcggccaaatctacgaggacgcacatattcaacaagaa
aagacgcaggaggccttgcaaatattgtccggggagaccgaagacgacgaggagaagccg
ctccgcgagattgaaaacgaccttatggagcttttcgactgggagcaccacgagcttgtg
gcgaagcttgttttgaacagggataaggtcgtgtgggtcacccggtggcgcagggttgag
gaggatccgaatgcgcggggggctatcgagagggagatgattgctgcgggccacaagaag
atcctgaacgagctacggacaagagaagacgctgcagcggacgggcctgcctccaagaag
atgaaggtggatcttatggacatcgacgtccccaaggcggaggagaaggcggacgctgga
aaggagaccggattggtcggcggacttcaacccagacggctgatcaacttggagaatctc
gtttttgagcaaggcaaccatctcatgacgaatcctaatgtcaagctgccacagggttcg
acaaagcgaacgttcaaaggctacgaggaaattcacgtaccagcgccaaagcccaagagg
gacccgaacgacccgccggatatgcccgttacggagttgccggagtgggcaagagtcggt
ttcggttcctcgaaaaatcttaacaggatccagacacgttgctatccaacggctttcaac
gacgatggcaacatgttgatttgcgcacctaccggttcaggaaagaccaacgttgctatg
ttgacgatgctccgcgagatcggcaagcacaggaatccggagaccggcgagatcaacttg
gacgagttcaagattatctacattgcccctctgaaggccctggtccaggagcaagtcgga
aactttggcaagaggcttgagccctacggcatcaaggtttctgagcttacgggtgatcgt
cagctcaccaagcagcagattgcagacacgcaggtgattgtcactacccctgagaagtgg
gacgtcatcactcgcaaggccactgataccagctacacgaacctggtgcgcctgatctgt
attgacgaaattcatttgctgcatgatgatcgtggtccagtcctggagagcatcgtcagc
agaacgattcgccgcatggagcagaccggcgatcctgtgcgtatcatcggtctcagtgcc
acgctccctaactaccgtgacgtcgccagcttcctgcgagttgatcccatcaagggcctt
ttccacttcgacggcactttcagaccttgtccgctgaagcaggagttcatcggtgtcaca
gataagaaggctatcaagcagctaaagaccatgaacgacgtctgctacaccaaggtcctg
gagcaagttggtcagaacgataatcagatgctcatcttcgtccactcacgaaaggagacg
gcgaagacggcgaagtacatccgcgacaaagcattggaacttgagaccatcggccagatc
attcgtagcgacgctgccagtcgagagattcttcggacggaatctgagggcgtgcagaac
gcagacctgaaggatgtgatgccctatggcttcggtattcaccacgctggtatgagccgt
gctgaccgtacctcggtcgaagacctcttcgcggatggttctctccgcgtcctggtctgt
accgccaccctggcttggggtgtcaaccttcctgcccatactgtcatcatcaagggtacg
cagatctactcgcctgagaagggtagctgggtcgagctcagcccgcaagatgtgctgcaa
atgcttggtcgtgccggtcgtccccagtacgatacgtacggtgaaggtatcatcataacg
acacagtctgagatgcagtactacctgtcccttatgaaccagcagcttccgattgagtct
cagttcatgagcaggctagccgacaacctaaacgccgaagttgtccttggaaatgttcgc
agtcgagacgaaggtgtcgagtggcttggttatacttacctctatgtgcgcatgctcaga
tcgccgggtctttacagcgtcggggccgagtacgaggatgatgaagctctggaacagaag
cgtgtcgatctgattcactccgctgccactgtgctggagaagtccaatctcgtcaagtac
gacaagaagagcggcaagctccagggcacggagcttggtcgcgttgcgtcgcactactac
atcacccacaactccatggccacgtacaacatgcacatccagcccagcatttcgacaatc
gagctcttccgcgtcttcgctctcagcgatgaatttaagtacattcccgtccgtcaagac
gagaagcttgaacttgccaagctcctgggccgcgtccctatcccggtcaaggagagcatc
gaagaacctcacgcaaagattaacgtcctccttcaggcttacatttcccgactcaagctt
gagggcctggctctcatggccgatcttgtctacgtcacgcagtccgccggtcgtattctc
agggcaatctttgagatttgtcttaagaagggatgggcacacgttgcgaagacggccctg
gacctatgcaagatggccgagaaacgcatgtggccgaccatgacgccgctccgtcaattc
cccaactgtccccgcgacattgtgcaaaaggccgagcgtatcgacgtgccctggtccagc
tacttcgatctcgacccgcctcgcatgggcgaacttatgggtttgcctcgtgctgggcgt
accgtctgcggcctggttgagaagttccctcgcctggagattcaggctcacgtccagcca
atgacgcgatctatgcttcgtatggagctgaccatcacgcccaacttcatatgggatgag
ttcctgcacggtaacgcggagagtttctggatcatcgtcgaggactgtgacggcgaggag
atcctcttccacgaccagttccttctgcgtcgcgagtacgctacgaatgagatgaacgag
catcttgtcgaattcacagtccccatcaccgagccgatgccgcctcattacttcatcacc
gtcgtctccgacaggtggatgcactcggagaccaaaattgccgtctccttccagaagctc
atcttgcctgagaagttccctccgcacactcagcttctggacctgcaaccgctgcctgtt
gctgccctcaagagacaggacttcacggatctgtatcccaactgggagcgcttcaacaag
gtccaaacgcagactttccaggctctcttccagcaggatgagaatgtccttgtcggtgcg
tcgaccggcatgggcaagaccgtctgcgctgaattcgctctgctgcggcactgggccaag
caggaaggcggaaaggctgtctacgtcgcccccttccaggaattggttgacaacagatac
aaggactggaagcagcgcctggccaatgtcgctggaggcaaggagattgtcaagctcgtt
ggtgacacaacttcggatctgcagctcctacaacagggcgatgtcatactggcaactcct
cagcagtgggatgtcatttcgcgccagtggcaacggcgtaagaacgtgcaggccgtcaag
ctcttcattgccgacgatctgcacatgctcggtggacagggcggttacgtctacgaaacc
atcgtctctagaatgcacgccatgacgttgcagctggaatcagagatgcgcatcgtcggt
ctcagcgtctcgctttcgaacgcccgcgatgttggcgagtggattggagcaaccaagcac
acaatcttcaacttcagccctcacgttcgggctgtgccgttggagcttcacatccaatcc
ttcaccatcccccacttcccgtcgttgatgcttgctatggctaagcctgcctaccaggct
gtgttgcagttgtcgcctgacaagcctgcgatgatcttcgtgccaagccgcaagcaagtc
agaaacactgctctggaccttgctgccaactgcgtggccgacgatgacgaggaccggttc
ttgcatgcgtctatcgaggagatgcgccctgtactggagaagatcaacgagcccgctctg
gctgagtctctctctcacggtattggctacttccacgaagcgctgtcggctttcgataag
agggccgtcgagcacttcttccgcgttggcgctatccaagtcctgctcgtctcgcgtgac
tgctgctgggagatcaatgtcaacgcacacctcgtggtcgtcatgaacacgcagttcttc
gagggcagagagcaccgttacatcgactaccctatcagcgaaatcctgcagatgttcggc
aaggctggacggccagggcaggagaagctcagcaggggtgtcttgatggtgcccgctgtc
aagcgggactactacaagaagttcctgaacgaagctctcccgatcgagtcgcatctccag
gtgttcctccacgatgcgttcgttgccgagattagcactcgcatgatctcttccactcaa
gacgccgtcgactggtcaacctacacctacttctaccgccgccttcttgcaaacccgagc
tactacggtctgactgatacctcgcacgagggcctgagcgcccacttgtctgaattggtc
gagacgacgctcaaggaccttgtcgaggcgaagatcattgaactggatgaggaggatgac
tcgatcacaccgctcaaccctgctatgattgcggcgtactacaatatctccttcattacc
atgcagacgttcctcctctcgctcaacggacgcacaaagctcaagggcatccttgaaatt
atcacctctgcgactgagttcgaaggcatccagatccggcggcacgaggaccacgttctg
cgacgcgtgtacgaccgcctgccggtcaagatggcggaggcatcgtacgaatcaccgcac
ttcaaggcgttcgtgctgctgcaggcgcatttcgcgcgcatgcagctccccgtcgacctg
gccaaggaccaagacacgattctgaagaaggtgcttccgctcctctcggcctgcgtcgat
gtcctctcgtccgagggccacctcaacgccatgaacgccatggagatctcgcagatggtg
gtccaggcaatgtgggaccgcgacagcccgctcaagcagatcccgcacttcgacaacagg
ctcgtccaggaggccaacacggccggcgtccaggacatttcggacttcatcgacgccatg
gacccggaggctcccaaccacaaggaccttacggaccgcctcaagctgtcgggccctcaa
cttgccgacgcggcccgcttcgtcaacgactactacccggacctatcggtcgagttcaac
gtgctcgagcccgaagacatcgccgcgggctcgcccgcgtacctcgacgtcacggtcacg
cgcgagatcgacgaggacgacagcccgcagacgacggtgcacgcgcccttcttcccggcc
gacaagacggagaactggtggctggtggtcggcgaggagagcaccaagagcctgctggcc
atcaagcgcgtcacggtgcagcgcgagctgcgcaccaagctcgaatacgtcgtccccaca
gcgggcgagcacgagctgacgctatacttgatgagtgacagctacatgggcgtggaccag
gcaccgaccttcaaggttacggcggcggaagggatggaggagagtgaggaggaggacgag
gaggatgaggagtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (34)   

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