KEGG   Neofusicoccum parvum: UCRNP2_7213
Entry
UCRNP2_7213       CDS       T03126                                 
Name
(GenBank) putative atp-dependent rrna helicase spb4 protein
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7]
Organism
npa  Neofusicoccum parvum
Brite
KEGG Orthology (KO) [BR:npa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:npa03009]
    UCRNP2_7213
Enzymes [BR:npa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     UCRNP2_7213
Ribosome biogenesis [BR:npa03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    UCRNP2_7213
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII
Other DBs
NCBI-ProteinID: EOD46059
UniProt: R1GJC8
Position
Unknown
AA seq 630 aa
MAPDKPKNLRAWDALTPPLSEWILDAVSSMGFERMTPVQASAIPLFMGYKDVVVEAVTGS
GKTLSFLIPVVERLLRLEEPLRKHHVGAVIVSPTRELATQIHAVLTSLLAFHAPSAAALL
PHDETSDGDERPSFPSSTLKVIPQLLLGGNTTPAQDLSTFLKTSPNLLIATPGRLLELLS
SPHVHCPQSSFEVLVMDEADRLLDLGFKDDLQKILQRLPKQRRTGLFSASVSEAVSQLVR
VGLRNPVRIAVKVKSASGALDKRTPASLQMNYLLTSPSHKLPAIAKLLSTLSPTPQRSII
YVSTCAGVDYFQHVLPSLLTTTTVVPLHGKHPQNVRERNFKRFTESVSPTVLLTTDVAAR
GLDIPLVDLVIQIDPPSDPKTFIHRCGRAGRAGRRGLAVTFLTKGTHEEDYIPFLAVRQT
PITPLTTPSVETTDAEAEEASETVREVVLKDRAIHDKAQRAFVSWVQSYSKHAASSIFRV
KEIDWKATADAWGLLKMPKMPELKAWDGDRKLGLSIDWDGYHFADKVREKRRREEEAKAK
EARENGIEERDPKKRRSGRDNAWSEQKEAKETREKRREKRANKREGERKKKLTDEERKKE
DELQAMIEKIKRKNEKKAAEDAEEWEGFDD
NT seq 1893 nt   +upstreamnt  +downstreamnt
atggctccggacaagcccaagaacctcagagcgtgggacgccctcacgccgccgctttcg
gagtggatcctggatgcggtttccagcatgggcttcgagcgcatgacgcccgtccaggcg
agcgccattccgctcttcatgggctacaaggatgttgtcgtcgaagctgtgaccggcagt
ggcaagaccttgtcgttcctgatccccgttgtcgagcgcttgttgcgtctggaggaacct
ctcaggaagcaccatgttggcgccgtcattgtatcgcccaccagggagctcgcgacacaa
attcacgctgtccttacctctctcctcgctttccacgccccttctgctgcagcattacta
ccccatgacgagacatccgacggcgacgagcggccttccttcccttcttcgaccctcaaa
gtgataccccagctgctccttggcggaaacaccacccctgcgcaagatctgagcactttt
ctcaagacctccccgaacctcctcattgctaccccaggccgtctcctggagctcctctct
tccccacacgtacactgcccgcagtcgtcatttgaagtgctggttatggacgaagccgac
aggttactggatcttggtttcaaggatgacctgcagaagatactacagcggctacctaag
cagagacgtacgggtctgttcagtgccagcgtgagcgaggctgtttctcagcttgtccgc
gttggtctgcggaacccagtgcgtattgccgtcaaggtcaagtctgcgtctggggccctc
gacaagagaactccagcgtccttacaaatgaactatctcctgacatcgccatctcacaaa
cttcccgccattgcaaagcttctctcgaccctctctcctactccacagagatctatcatc
tacgtttccacctgtgctggcgtcgactacttccagcatgtgttgccgagcctactcact
accacgaccgtcgtacctttgcatggaaagcatcctcagaacgtgcgcgaaaggaatttc
aagcgcttcaccgagagcgtctcccccaccgttctcctcaccaccgatgtcgctgcccgt
ggtctggacatccctctcgtggaccttgtcatccagattgaccccccctcagaccccaaa
accttcatccatcgttgcgggcgagctggccgtgcaggacgccgcggcctggcagtcacc
ttcctaaccaagggcacccacgaagaagactacattcccttcctcgcagtccggcagact
cccatcactcccctaacaaccccgagcgttgagactaccgacgcggaggccgaagaggcg
tccgagaccgttcgtgaagtggtgctaaaggatcgcgccatccacgacaaggcacaacgg
gctttcgtcagctgggtgcagtcgtacagcaagcacgccgcaagcagcattttccgcgtc
aaggagatcgactggaaggcaaccgcagatgcgtggggcttgctgaagatgccgaagatg
ccggagctgaaggcctgggacggcgatcggaaactgggcctttcgatcgactgggacggc
taccacttcgccgacaaggtgcgggagaagaggcggagagaagaggaggcgaaggcgaag
gaggcgagagagaacggaatcgaggagcgagacccgaagaaacggagaagcgggagggat
aatgcatggagtgagcagaaggaggcgaaggagacgagggagaagagaagggaaaagagg
gcgaataagcgggagggagagcgcaagaagaagttgacggatgaagagcggaagaaggag
gatgagttgcaggcaatgattgagaagatcaagaggaagaatgagaagaaggcagcggaa
gatgctgaggagtgggaggggtttgacgattga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (31)   

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