KEGG   Natrinema pellirubrum: Natpe_0932
Entry
Natpe_0932        CDS       T02425                                 
Name
(GenBank) DNA/RNA helicase, superfamily I
  KO
K10742  DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]
Organism
npe  Natrinema pellirubrum
Pathway
npe03030  DNA replication
Brite
KEGG Orthology (KO) [BR:npe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Natpe_0932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:npe03032]
    Natpe_0932
Enzymes [BR:npe01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     Natpe_0932
DNA replication proteins [BR:npe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Natpe_0932
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Natpe_0932
SSDB
Motif
Pfam: AAA_12 AAA_11 Dna2 PDDEXK_1 AAA_30 AAA_19 Viral_helicase1 AAA_16 UvrD-helicase ResIII Cas_Cas4 AAA_22 Helicase_RecD PhoH AAA_25 AAA_7 AAA UvrD_C_2 bpMoxR nSTAND3 SLFN-g3_helicase SRP54 DEAD AAA_5 RuvB_N AAA_24 Mg_chelatase
Other DBs
NCBI-ProteinID: AGB30846
UniProt: L0JKH3
Position
complement(908298..911075)
AA seq 925 aa
MYVRGTVAGEVDVRTVSTSYGESDLAEVPVRLATDDEPAGDATPTRSDGGTAAVADGRET
TVTLWNKWTESAELLEPGMELVVTNAKEEEYQGETQYKTTGESYVVVEPSFLVSVTSIRN
WVECPRLYYLNKLSGVPLNYPVVKGTLVHEVFGDLLRGRDLEESIDARVEERGLQLGLLG
ETPDAVKEEIRENAKAIEGWLEQGRLTEEDSWRSEQLLISETFGIRGRADAVRRGAPVEL
KTGKNLKKEPRFKDKVQAACYALLLEEHGGDVDIGTLLYTKNSALDRNEETGDLTPAKEF
TMGDGLLKYVVRLRNEIAAKETSGEIPTGYEADAKCEYCFEQDTCMVVSGRLDQESKAGQ
IGQALPAEEREYFDRFYRAIEEERREVHREYAKLWEQTAEERADDDRALIDLEFVAKRPL
EGGRWELRARRTGGANSKLREGDLVLASDGDPVRGDSELARIERLDDEVVITADEPVAVT
RLDVYPSELTTDRLLVAMHDALLKGDERRKDVLFGRAEPEFEEIDEAFIDNNERQNEAVR
KAVGAEDCALIHGPPGTGKTYTIARAIRAMVERGERVLLSAFTNRAVDNALEALLEQLED
VIDEDSVASETQRSGDGEAVDVVRVGSESGVSDEMEPYRLERAGEPADRVAELEDAQVVA
ATTATCGSRIMKEQAFDAALVDEAAQLTEPGTCAAINLAERFVLVGDHEQLPPVVRAEND
LTESLFERLVERYPDAGVMLDRQYRMNQRIQVFASTEFYDGQLRPATPEVAGRTLDDLEG
VSRDALPETLSDPVSFVDVEGDRSQYTDSEEAERIADLIERYEAAGLERSDIGVIAPFRA
QVSEISSTVPDDVTVDTVDRFQGSSQEVIIVSFTATGSLEGPIFEDYRRINVALTRPKRA
LVLVGDSSALASDPVYERMLEWARQ
NT seq 2778 nt   +upstreamnt  +downstreamnt
gtgtacgtacgcggaaccgtcgccggcgaggtcgacgtgcgaacggtgtcgacgagctac
ggcgaaagcgatctcgcggaggtcccggtccggctcgcaaccgacgacgagcccgccggc
gacgctacgccgacgcgcagcgacggcggcacggcggccgtcgcggacggccgcgaaacg
acggtgacgctctggaacaagtggaccgagtcggccgagttgctcgagccggggatggaa
ctggtcgtgacgaacgcgaaagaagaggagtatcagggcgagacccagtacaagacgacg
ggcgagtcctacgtcgtcgtcgaaccatcctttctcgtcagcgtcacctcgatccgcaac
tgggtggagtgtccccggctctactacctgaacaagctctccggagtgccgctgaactat
cccgtcgtgaaagggacgctcgtccacgaggtcttcggcgacctgcttcgcgggcgggac
ctcgaggagtcgatcgacgcccgcgtcgaggagcgaggcctccagttggggctgttaggc
gagacgcccgacgcggtcaaagaggagatccgggagaacgccaaagcgatcgagggctgg
ctcgagcagggccggctcaccgaggaagacagttggcgctccgagcagttgctcatcagc
gaaacgttcggcattcgcggccgggccgacgccgtccgccggggcgcaccggtcgaactc
aagaccggcaagaacctcaagaaggaaccgcggttcaaggacaaggtgcaggccgcctgt
tacgcactcctgctcgaggaacacggcggcgacgtcgatatcgggacgctcctctatacg
aagaactcggcgctcgatcgcaacgaggagaccggcgacctgacccccgcaaaggagttc
acgatgggcgacggcttgctgaagtacgtcgtccggctccgcaacgagatcgccgcaaaa
gagacgagcggagagattccgaccggctacgaggccgacgcgaaatgcgagtactgcttc
gaacaggacacctgcatggtcgtctccggccggctggatcaggagtcgaaggccggccag
atcgggcaggcgctgccggccgaggagcgcgagtacttcgaccggttttaccgggcgatc
gaggaggagcgccgggaggttcaccgcgagtacgccaagctctgggaacagaccgcggag
gaacgggccgacgatgaccgcgcgctgatcgacctcgagttcgtcgcaaaacggccgctc
gagggcgggcgctgggaactgcgggcgcgccggaccggcggcgcgaactcgaagctccgc
gagggcgacctggtgctggccagcgacggggacccggttcgaggcgactcggagctggcg
cggatcgagcgactcgacgacgaggtcgtgatcacggcggacgagccggtcgcggtcacc
cggctcgacgtctacccctccgagctgacgaccgaccggttgctcgtcgcgatgcacgac
gcgctcctgaaaggcgacgagcggcgcaaagacgtcctgttcggccgcgcagagcccgaa
tttgaggagatcgacgaggccttcatcgacaacaacgagcgccagaacgaggccgttcgg
aaagccgtcggtgctgaggactgcgcgctgatccacggcccgccggggaccgggaagacc
tacaccatcgctcgagccatccgcgcgatggtcgaacgcggcgagcgggtcctgctgtcg
gcctttacgaaccgcgccgtcgacaacgctctggaggccctgctcgagcaactcgaggac
gtcatcgacgaggacagcgttgcgtcggagacgcaacggagtggagacggcgaagccgtc
gatgtcgtccgcgtcggctcggagagcggggtcagcgacgagatggagccctaccggctc
gagcgggcgggcgagcccgccgaccgggtcgccgaactcgaggacgcgcaggtagtggcg
gcgacgacggcgacctgcggatcgcggatcatgaaagaacaagccttcgacgccgcgctg
gtcgacgaggccgcccagctgaccgagcccgggacctgcgcggcgatcaacctcgccgag
cggttcgtgctggtcggcgaccacgagcagctgccgcccgtcgtgcgcgccgagaacgac
ctcaccgagtcgctgttcgagcggctggtcgagcgctatcccgacgccggcgtcatgctc
gatcgccagtaccggatgaaccagcgcattcaggtcttcgcctccaccgagttctacgac
ggacagctacgaccggcgacgcccgaggtcgccggacgaacgctggacgacctcgagggc
gtctcccgggacgccctgcccgagaccctgtccgatcccgtctcgttcgtcgacgtcgag
ggcgaccggagccagtacaccgacagcgaggaggccgaacgaatcgccgacctgatcgag
cgctacgaagcggccggtctcgagcgatccgacatcggcgtcatcgctccgttccgagcg
caggtctcggagatctcgagtacggtccccgacgacgtcaccgtcgacaccgtcgaccgc
ttccagggctcgagccaggaagtcatcatcgtctcgttcaccgcgaccggttcgctcgag
ggaccgatattcgaggactaccggcggatcaacgtcgcgctgacacggcccaagcgggcg
ctggtgttggtcggcgactcgtcggcgctcgcgagcgatccggtctacgagcgcatgctc
gagtgggcgcggcagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (37)   

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