KEGG T01515: PP1Y

Novosphingobium sp. PP1Y: PP1Y_AT26396

Entry

PP1Y_AT26396 CDS T01515

Definition

ABC transporter

Orthology

K06158

ATP-binding cassette, subfamily F, member 3

Organism

npp Novosphingobium sp. PP1Y

Class

SSDB

Motif

Pfam:

ABC_tran ABC_tran_2 AAA_21 SMC_N AAA_29 AAA_17 AAA_22 AAA SbcCD_C NACHT AAA_25 MMR_HSR1 AAA_13 Miro DUF258 AAA_18 RNA_helicase AAA_16 UPF0079 NTPase_1 PduV-EutP ArgK AAA_23 DUF815 Dynamin_N RuvB_N AAA_28 Myc_N DUF2968 IncA

Other DBs

NCBI-GI:

334142031

NCBI-GeneID:

10715961

UniProt:

F6IPR8

Position

2768575..2770458

AA seq 627 aa
MLTIRELSVRLGGRTILDQATATIPHGGKVGLIGRNGAGKSTLVKAIIGEIEPDGGGAEM
PRRARLGYIAQEAPSGTRTPFEAVLEADAERTALLAESETCTDPHRLGDVHERLIAIDAY
SAPARAARILVGLGFDEEMQSRPLDSFSGGWKMRVALAALLFSAPDVLLLDEPSNHLDLE
ATLWLESFLQSYPGTLIVISHERDLLNTVVDHILHLQQGKLTLYPGTYDSFERIRAERVA
QAEAARANQEAQRKKLADYVARNSARASTAKQAQSRAKMLAKMQPIAAMSEDPSLSFDFP
SPDELRPPLVTLDLAAVGYTPGEPVLKRLNLRIDPEDRIALLGRNGNGKTTLARLLAQQL
EPMEGAITFSGKIRIGYFTQYQVEELPSGSTPLELMTRAMADKPPQAVRNQLGRFGFSGE
RATAETHTLSGGERARLALALVTRDAPHLLILDEPTNHLDVDAREALVQALNAFEGAVIL
VSHDRHMVELAADRLVLVDEGTAKPYDGSMEDYIDFVLGRNQPKTEDRPGASEAKPQRKA
GAIAREELKAARRKVSEAETRLSRLQKQLDELDNALVEPTKAKGELARLGIGEIGKRRTA
AAEQLEEAEMAWLEASEALESVMGGAA

NT seq 1884 nt +upstreamnt +downstreamnt
atgttgacgatccgcgaactgtccgtgcgccttggtgggcgcactatccttgaccaggcc
actgcaaccattccccatggcgggaaggtggggctgatcggccgcaacggcgccggcaag
tcgacgctggtcaaggcgatcatcggcgagatcgagcctgacggcggcggcgccgaaatg
ccgcgccgcgcgcgtctgggctacatcgcccaggaagcgccgagcggcacccgcacgcct
ttcgaagccgtgctggaagccgacgcggagcgcactgcgctgctggccgaatccgaaacc
tgcaccgatccacatcgcctcggcgacgtgcacgagcggctgatcgcaatcgacgcttac
agcgcccctgcccgcgctgcgcgcattctggtcggcctcggcttcgacgaggaaatgcag
tcgcgaccgctcgacagcttctcgggcggctggaagatgcgcgtggcccttgccgcgctg
ctgttctcggcccctgacgtgctgctgctcgacgaaccgtcgaaccacctcgaccttgag
gcaacgctctggctggaaagcttcctgcaaagctatcccggcacgctcatcgtcatcagc
cacgagcgagacctgctcaacaccgtggtcgatcacatcctgcacctgcagcagggcaag
ctcacgctttatccgggcacttacgacagcttcgagcgcatccgcgccgagcgcgtggcg
caggccgaagccgcgcgtgccaaccaggaagcacagcgcaagaagctggccgactatgtc
gcgcgcaacagcgctcgtgcttccaccgccaagcaggcgcagtcgcgcgccaagatgctg
gccaagatgcagccgatcgcggcgatgagcgaggatccctcgctcagcttcgacttcccg
agcccggacgaactgcgcccgccgctggtcacgctcgatcttgccgccgtcggctacacg
ccgggcgaaccggtcctcaagcggctgaacctgcggatcgacccggaggaccgcattgcc
ctgctcggtcgcaacggcaacggcaagaccacgcttgcgcgcctgctcgcgcagcagttg
gaaccgatggaaggcgcaattaccttctccggcaagatccggatcggctacttcacccag
taccaggtcgaggaactgccgagcggatccactccgctcgagctgatgacccgcgcgatg
gccgacaagccgccgcaggccgtgcgcaaccaactgggccgtttcggcttttccggggag
cgggcgacggcggaaacgcataccctgtccggcggcgagcgcgcgcgcctggcccttgcc
ctcgtcacccgcgatgcgccgcacctgctgatcctcgacgagccgaccaaccacctcgac
gtcgatgcacgcgaggcactcgtacaggcgctcaatgccttcgaaggcgctgtcatcctc
gtcagccacgatcgccacatggtcgaactcgcagccgaccggctggtgctggtcgatgag
ggtacggccaagccctacgacggatcgatggaggactatatcgacttcgtcctcgggcgt
aaccaacccaagaccgaagaccggcccggcgcttcggaagccaagccgcagcgcaaggcg
ggagccatcgcccgcgaagaactcaaggccgcgcgccgcaaggtgtcggaagccgagacg
cgcttgtcgcgcctgcaaaagcagctcgacgaactcgacaatgctctcgtcgaacctacc
aaggccaagggagaacttgcgcgcctgggcatcggcgaaatcggcaagcggcgtacggcg
gcagcagagcagcttgaggaagcggagatggcgtggctggaggccagcgaagcgcttgaa
tcggtgatggggggcgcagcatga

All links

Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (30)   
   Pfam (30)   
All databases (37)   

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