KEGG   Novosphingobium sp. PP1Y: PP1Y_AT26396
Entry
PP1Y_AT26396      CDS       T01515                                 
Name
(GenBank) ABC transporter related
  KO
K06158  ATP-binding cassette, subfamily F, member 3
Organism
npp  Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:npp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:npp03012]
    PP1Y_AT26396
Translation factors [BR:npp03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    PP1Y_AT26396
SSDB
Motif
Pfam: ABC_tran ABC_tran_Xtn AAA_21 SMC_N AAA_29 AAA_22 AAA MMR_HSR1 TsaE NACHT RsgA_GTPase AAA_16 NB-ARC RNA_helicase NTPase_1 nSTAND3 SbcC_Walker_B ATP-synt_ab MeaB AAA_28 AAA_15 AAA_23 AAA_13 RuvB_N DUF815 Uds1 Myc_N Exog_C
Other DBs
NCBI-ProteinID: CCA93420
UniProt: F6IPR8
Position
2768575..2770458
AA seq 627 aa
MLTIRELSVRLGGRTILDQATATIPHGGKVGLIGRNGAGKSTLVKAIIGEIEPDGGGAEM
PRRARLGYIAQEAPSGTRTPFEAVLEADAERTALLAESETCTDPHRLGDVHERLIAIDAY
SAPARAARILVGLGFDEEMQSRPLDSFSGGWKMRVALAALLFSAPDVLLLDEPSNHLDLE
ATLWLESFLQSYPGTLIVISHERDLLNTVVDHILHLQQGKLTLYPGTYDSFERIRAERVA
QAEAARANQEAQRKKLADYVARNSARASTAKQAQSRAKMLAKMQPIAAMSEDPSLSFDFP
SPDELRPPLVTLDLAAVGYTPGEPVLKRLNLRIDPEDRIALLGRNGNGKTTLARLLAQQL
EPMEGAITFSGKIRIGYFTQYQVEELPSGSTPLELMTRAMADKPPQAVRNQLGRFGFSGE
RATAETHTLSGGERARLALALVTRDAPHLLILDEPTNHLDVDAREALVQALNAFEGAVIL
VSHDRHMVELAADRLVLVDEGTAKPYDGSMEDYIDFVLGRNQPKTEDRPGASEAKPQRKA
GAIAREELKAARRKVSEAETRLSRLQKQLDELDNALVEPTKAKGELARLGIGEIGKRRTA
AAEQLEEAEMAWLEASEALESVMGGAA
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgttgacgatccgcgaactgtccgtgcgccttggtgggcgcactatccttgaccaggcc
actgcaaccattccccatggcgggaaggtggggctgatcggccgcaacggcgccggcaag
tcgacgctggtcaaggcgatcatcggcgagatcgagcctgacggcggcggcgccgaaatg
ccgcgccgcgcgcgtctgggctacatcgcccaggaagcgccgagcggcacccgcacgcct
ttcgaagccgtgctggaagccgacgcggagcgcactgcgctgctggccgaatccgaaacc
tgcaccgatccacatcgcctcggcgacgtgcacgagcggctgatcgcaatcgacgcttac
agcgcccctgcccgcgctgcgcgcattctggtcggcctcggcttcgacgaggaaatgcag
tcgcgaccgctcgacagcttctcgggcggctggaagatgcgcgtggcccttgccgcgctg
ctgttctcggcccctgacgtgctgctgctcgacgaaccgtcgaaccacctcgaccttgag
gcaacgctctggctggaaagcttcctgcaaagctatcccggcacgctcatcgtcatcagc
cacgagcgagacctgctcaacaccgtggtcgatcacatcctgcacctgcagcagggcaag
ctcacgctttatccgggcacttacgacagcttcgagcgcatccgcgccgagcgcgtggcg
caggccgaagccgcgcgtgccaaccaggaagcacagcgcaagaagctggccgactatgtc
gcgcgcaacagcgctcgtgcttccaccgccaagcaggcgcagtcgcgcgccaagatgctg
gccaagatgcagccgatcgcggcgatgagcgaggatccctcgctcagcttcgacttcccg
agcccggacgaactgcgcccgccgctggtcacgctcgatcttgccgccgtcggctacacg
ccgggcgaaccggtcctcaagcggctgaacctgcggatcgacccggaggaccgcattgcc
ctgctcggtcgcaacggcaacggcaagaccacgcttgcgcgcctgctcgcgcagcagttg
gaaccgatggaaggcgcaattaccttctccggcaagatccggatcggctacttcacccag
taccaggtcgaggaactgccgagcggatccactccgctcgagctgatgacccgcgcgatg
gccgacaagccgccgcaggccgtgcgcaaccaactgggccgtttcggcttttccggggag
cgggcgacggcggaaacgcataccctgtccggcggcgagcgcgcgcgcctggcccttgcc
ctcgtcacccgcgatgcgccgcacctgctgatcctcgacgagccgaccaaccacctcgac
gtcgatgcacgcgaggcactcgtacaggcgctcaatgccttcgaaggcgctgtcatcctc
gtcagccacgatcgccacatggtcgaactcgcagccgaccggctggtgctggtcgatgag
ggtacggccaagccctacgacggatcgatggaggactatatcgacttcgtcctcgggcgt
aaccaacccaagaccgaagaccggcccggcgcttcggaagccaagccgcagcgcaaggcg
ggagccatcgcccgcgaagaactcaaggccgcgcgccgcaaggtgtcggaagccgagacg
cgcttgtcgcgcctgcaaaagcagctcgacgaactcgacaatgctctcgtcgaacctacc
aaggccaagggagaacttgcgcgcctgggcatcggcgaaatcggcaagcggcgtacggcg
gcagcagagcagcttgaggaagcggagatggcgtggctggaggccagcgaagcgcttgaa
tcggtgatggggggcgcagcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (35)   

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