KEGG   Nicotiana sylvestris (wood tobacco): 104211830
Entry
104211830         CDS       T05026                                 
Name
(RefSeq) squalene synthase-like
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy00100  Steroid biosynthesis
nsy00909  Sesquiterpenoid and triterpenoid biosynthesis
nsy01100  Metabolic pathways
nsy01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    104211830
  09109 Metabolism of terpenoids and polyketides
   00909 Sesquiterpenoid and triterpenoid biosynthesis
    104211830
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:nsy01006]
    104211830
Enzymes [BR:nsy01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     104211830
Prenyltransferases [BR:nsy01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   104211830
SSDB
Motif
Pfam: SQS_PSY
Other DBs
NCBI-GeneID: 104211830
NCBI-ProteinID: XP_009759256
UniProt: A0A1U7V2S2
Position
Unknown
AA seq 411 aa
MGSLGAMLRNPEDIYPLMKLKLAARYAEKQIPPQPHWAFCYIMLHKVSRSFSLVIQQLPL
ELRDAVCIFYLVLRALDTVEDDTSVATEVKVPILMSFHRHVYDREWHFSCGTKDYKVLMD
QFHHVSTAFLELEKHYKEAIEDITMRMGAGMAKFICKEVETIGDYDEYCHYVAGLVGLGL
SKLFRASGKEDFASDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPRQIWSKYVDKL
EDLKCEENSVKAVQCLNEMVTNALSHVEDSLTYMSTLRDPAIFRFCAIPQVMAIGTLAKC
YNNIEVFRGVVKMRRGLTAKVIDRTRTMADVYGAFYDFSCILKAKVEYKDPNAAKTLRRL
ETILRTCKNSGTLNKRKSFVIQSRPNYNSALVVVLVVIIAILIAYLSGNRP
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggggagtttaggtgcaatgctgaggaatcctgaggatatttatccattgatgaaactg
aagttagcggcgcgatatgcagagaaacagatccctcctcagccacattgggccttctgt
tatataatgcttcacaaggtttctcgtagcttttctcttgtcattcaacagcttcccttg
gagcttcgcgacgctgtatgcattttctatttggttcttcgagcacttgacactgtcgag
gacgataccagtgtagccacggaggtgaaagtacctattttgatgtcattccatcgccat
gtttatgatcgtgaatggcatttttcgtgcggtacaaaggactacaaggttcttatggac
cagtttcatcatgtttcgactgcttttctggagctagagaaacattacaaggaggcaatt
gaggacataactatgaggatgggtgcaggaatggcaaagtttatatgcaaggaggtggaa
acaattggtgattatgatgaatattgtcactatgtagccgggctcgttggattaggctta
tcaaaacttttccgcgcctctgggaaagaagattttgcatcagattctctctccaattcc
atgggtttatttcttcagaaaacaaatatcattagagattatctggaggacataaatgaa
gtacctaagtgtcgcatgttttggcctcgtcagatttggagtaaatacgttgacaagctc
gaggacttgaagtgtgaggaaaactctgtaaaggcagtgcaatgtctgaatgaaatggtc
actaatgctttatcacatgtagaagatagtttgacttacatgtccacactgcgagatcct
gctatctttcgattctgtgctattccacaggtcatggcaattgggacattagcaaagtgc
tacaacaacattgaagttttcagaggagttgtaaaaatgagacgcggtctcactgctaag
gttattgaccggaccaggaccatggccgatgtatatggtgctttctacgacttctcttgt
attctgaaagccaaggtggagtataaagatccaaatgccgcaaaaactttaagaaggctt
gaaacaatcttgagaacttgcaaaaactctggaaccttgaataaaaggaaatctttcgta
atccagagcagacctaattacaattcagctttggttgttgtccttgttgtcataatagct
atccttattgcatacctatctggaaaccggccttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (6)   
   KEGG PATHWAY (4)   
   KEGG MODULE (2)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system