KEGG   Nicotiana tabacum (common tobacco): 107775238
Entry
107775238         CDS       T04643                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
  KO
K11982  E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]
Organism
nta  Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:nta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nta04131]
    107775238
   04121 Ubiquitin system [BR:nta04121]
    107775238
Enzymes [BR:nta01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107775238
Membrane trafficking [BR:nta04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab associated proteins
    107775238
Ubiquitin system [BR:nta04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107775238
SSDB
Motif
Pfam: zf-RING_2 zinc_ribbon_9 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-RING_UBOX zf-rbx1 zf-ANAPC11 zf-C3HC4_3 Anti-TRAP DUF2116 zf-RING_5 zf-Nse
Other DBs
NCBI-GeneID: 107775238
NCBI-ProteinID: XP_016450440
UniProt: A0A1S3YE06
Position
Un
AA seq 338 aa
MSSTENPNNGIRNFRRYWCYQCHRTVIISPENPSEIVCPRCFGHFLCEIEETNARQILDF
TAFDPSPEARILEALTLMLDPNLFNRSSSGNAVPIFRRSDGTETIVPSDSIRPTREQRRT
RDSWLRPRRRYSFLSNDTDEWTPESGILARPRSWIILRPAGEYSSGGPNRLGERRLGPPS
GVNDRDYFTGPGLENLIEELTENDRPGPAPAPEPIINSIPTVVITPEHLRDDSECPVCKE
KFKIGGEARELPCKHIYHSDCIVPWLRLHNSCPVCRNPLPVSSEIQMDTSDDCLEEGINR
QRRCFRLRQIAASLWPFRSRYRPLRNHDEPSGPSCHIL
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgtcctcaacagaaaaccctaataatgggatcaggaacttccggcgttactggtgttat
caatgccatcgcactgtcataatatcgcccgaaaacccttcggagatcgtttgtcctcga
tgtttcggccacttcctttgcgaaatcgaagaaacaaacgctagacaaatcttggacttc
actgcatttgatccttccccagaagctagaattcttgaagctctaactctcatgcttgat
cctaatttgttcaacagatctagcagtggcaatgcagttcccatttttcgacgatcggac
gggacagaaaccatagtaccatctgattctatcaggcctacacgtgaacaacgcagaaca
cgagactcctggctaaggccaagaagacgatactcatttctaagtaatgacacggatgaa
tggacaccggagagtggaattctagcacgtccacgttcatggattattcttcggccagcc
ggagaatattcttccggtggacctaaccgactaggagaaaggcggttaggtccaccttca
ggagtgaacgatagagattactttacaggtccaggccttgaaaacctaatagaagagtta
actgaaaatgatcggccaggtccagcaccggcaccagagccaatcataaattctattccg
acggtggtgattacgccagaacacttaagggatgattcagaatgtcctgtttgtaaggaa
aagttcaaaataggcggagaagcaagagagttgccatgcaaacatatataccattccgat
tgcattgtgccttggttaaggcttcataattcttgcccggtttgtcgaaatccgttgccg
gtttcttctgaaattcaaatggatacttcggatgattgtcttgaagaagggatcaataga
cagcggcgttgcttcagacttagacaaattgcagcttctctttggccatttcgttcgagg
tatcgccctttgcgtaaccatgatgaaccgtcggggccttcatgtcatattctttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (26)   

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