KEGG   Nicotiana tabacum (common tobacco): 107804209
Entry
107804209         CDS       T04643                                 
Name
(RefSeq) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta00040  Pentose and glucuronate interconversions
nta01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:nta00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107804209
Enzymes [BR:nta01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     107804209
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD
Other DBs
NCBI-GeneID: 107804209
NCBI-ProteinID: XP_016483544
UniProt: P40972 A0A1S4B3W9
Position
Un
AA seq 397 aa
MDVYRIRISVFFLLVLLTFAALTTATNIPRRQLSNKKYKGPCRAENAIDKCWRCDPNWAE
NRQKMADCALGFGSNAIGGKLGRIYVVTDNSDDDVVDPKPGTLRYGVIQKEPLWIIFGKN
MKIKLSRELIVTSNKTIDGRGFNVHIQNGAGIKIQSASNIIISNLRIHNIVPTPGGLLRE
SEDHVGLRGSDEGDGISIFSSHDIWIDHISMSRATDGLIDAVAASTNITISNCHFTDHEK
VMLFGANDHYVLDKDMKITLAYNHFGKRLDQRMPRCRFGFFHLVNNDYTHWERYAIGGSS
GATIISQGNRFIAEDELLVKEVTYREKLTASVAEWMKWTWISDGDDMENGATFTPSGDQN
LLDKIDHLNLIKPEPSSKVGILTKFSGALSCVKGRPC
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggacgtctacagaataagaattagtgtattttttctccttgtgttactcacatttgct
gcattaacgacagcaacaaacatcccaagaaggcaactcagtaacaagaaatacaaaggc
ccatgccgggccgaaaatgcaatcgacaaatgctggcgatgcgacccaaattgggccgag
aatcgccagaaaatggccgattgcgcattgggctttggcagcaatgcgatcggaggaaag
ttgggccgaatttacgtcgtcacggacaattctgacgacgatgttgtcgatcctaagccc
ggaactctccgatatggcgttatccaaaaggagccattgtggatcatatttggcaaaaac
atgaaaattaagcttagtagggaacttatcgtgactagcaacaaaactatcgacggccga
ggatttaatgtccatatacaaaatggagctggcattaagatacaatctgcatccaatatt
attatttctaacctccgtattcacaatattgtacccaccccaggtggcctgctcagggaa
tctgaggaccacgttggtctaaggggtagcgatgaaggtgatggcatcagcatcttcagt
tcgcatgatatatggatcgatcacatttccatgtctcgtgcaaccgatggtcttatcgat
gctgttgctgcttccactaacattaccatatccaattgccacttcactgaccacgaaaaa
gtaatgttgttcggcgccaacgatcattacgtgcttgacaaggacatgaaaattacatta
gcgtacaaccactttggaaagaggttggatcaaaggatgccaagatgcaggtttggattt
ttccatctggtgaacaatgactacactcattgggagaggtacgctattggcggaagcagt
ggagccaccattattagccagggtaatcgatttattgctgaggatgaattgttggtgaaa
gaagtaacatatagagaaaaacttacggcgagtgtggcggaatggatgaaatggacttgg
atatcagatggtgatgatatggaaaatggtgctacatttacaccatctggtgaccagaat
ttactcgataaaattgaccatctcaatctgattaaaccagaaccttcttctaaagttgga
attcttactaagttttctggtgctctgtcttgcgtcaaaggacgtccatgctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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