KEGG   Nicotiana tabacum (common tobacco): 107818648
Entry
107818648         CDS       T04643                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107818648
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nta03041]
    107818648
   03009 Ribosome biogenesis [BR:nta03009]
    107818648
Enzymes [BR:nta01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107818648
Spliceosome [BR:nta03041]
 Complex A
  U1 snRNP components
   U1 related factors
    107818648
 Complex B
    107818648
Ribosome biogenesis [BR:nta03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    107818648
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 107818648
NCBI-ProteinID: XP_016500175
UniProt: A0A1S4CG73
Position
Un
AA seq 646 aa
MSYSNYDSRYGDSGSYRQRRSDLMGPPHIYSRPMAGGAAASYGRGGPVPYGGPQAPPMDA
GARGSSGMGGSGPVDGGFNGYPPFEGGFSRGAGMGRDSGFGGDRVANGGMGDRPGRFGAG
SNNTGSRSGGRGGRDFDGGYSGGRGGGRFSSDGGRGSSGGRGGGRHGSSRDDLDNLTLPK
VDFGNLVPFEKNFYVEHHSVRAMTEEDVALYRARREITVEGHDVPRPIQMFHEANFPDYC
LEVISRLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVRAQRLAHGD
GPIVLVLAPTRELAVQIQKEAVKFGSRANISSTCIYGGAPKGPQIRDLKRGVEIVIATPG
RLIDMLEAQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPKEV
ESLARQFLRNPYKVIIGSPDLKANQSIRQIVEVVTDLEKYRRLIGLLKEMMDGSRILIFV
ETKKGCDQVTRQLRMDGWPALSIHGDKSQDERDWVLAEFKNGRSPIMIATDVAARGLDVK
DIKCVVNYDFPSSLEDYIHRIGRTGRAGATGTAFTFFTHANAKYTRQLIKILQQAGQIVP
PQLSALAGSTSHSTGGSNFRSRGRGGFGNRDQKSGSNVIPLGRRPW
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgagctactctaattacgactccagatatggtgactcaggctcctatcgccagcgtcgc
agtgacctaatgggtccacctcatatatattctcggcctatggctggtggagctgcggct
agctacggtcgtggtgggcccgttccttatggcggtccacaagcaccgcctatggacgct
ggtgctagagggagtagtggtatgggtggatctggacctgttgatggcgggttcaatggg
tatccaccttttgaaggtggtttttcaagaggggctggtatgggccgggacagtggcttt
ggaggtgacagagtggctaacggtggtatgggagaccggcctgggcgatttggtgcaggg
tcaaacaacactggaagtaggagtggtggaagaggaggtagggattttgatggaggctac
agtggtggacgtggaggtggaaggtttagttcagatggaggccgtggtagtagtggtggg
agaggaggaggtaggcatgggagctcacgagatgatctagacaaccttactcttccaaag
gtagactttggaaacttggtacccttcgagaagaatttttatgttgaacatcactctgtg
agggcaatgactgaagaggatgttgctctttatcgtgcacggcgtgagattactgttgaa
ggccatgatgtccctaggccaattcagatgttccatgaggcaaactttcctgattattgc
ctcgaggttatttcaagattaggatttgttgagccaacacctatccaatcacaaggatgg
ccaatggctttaaagggcagagacttaatagggattgctgaaactggttctgggaagact
ttggcatatctattgccggctttggtccatgtccgcgcacaacggttggcacatggtgat
ggcccaatcgtgctagtattagcacctacgagagaattggctgttcagattcaaaaagaa
gctgtcaaatttggatcgcgtgccaacattagtagtacttgcatttatggtggtgcccca
aaaggacctcaaatccgtgatcttaaaagaggagttgaaattgtaattgcaacccctggt
cggttaatagatatgctggaagctcaacatacaaacttgaaaagagtgacttatctcgta
ctggacgaggctgatcgaatgctggatatggggtttgagcctcaaatcaggaaaataatt
tcccagattagaccagatagacaaaccttgtattggagtgcgacttggcccaaagaggtt
gaaagcctggctaggcagtttctacgcaatccctataaggtcatcattgggtctccagac
ttgaaagcaaatcaatctataaggcaaatcgttgaagttgtcacagatttagagaagtat
agaaggttgattgggcttttgaaagaaatgatggatggaagcagaatcctaatatttgta
gaaacaaagaaaggatgtgatcaagtgacaagacagttgagaatggatggatggccagct
ttatccatccatggcgataaaagccaggatgagagggattgggtcctggctgaattcaaa
aatggcagaagtcccataatgattgctactgatgttgctgcacgtggtcttgatgttaag
gacataaagtgtgttgtcaactatgatttcccttcaagtcttgaggattatattcatagg
attggcagaactggacgtgcaggtgccacgggaactgcatttacatttttcacccatgca
aatgccaagtatacccgacagcttattaagatccttcagcaggcagggcaaattgttcca
cctcaactttctgcattggcagggtctacttctcacagcactggagggagcaatttccgg
tctagaggacgaggtggctttggaaaccgggaccagaagtctggatccaacgtaattccg
cttggtagaaggccttggtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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