KEGG   Nicotiana tomentosiformis: 104088912
Entry
104088912         CDS       T05025                                 
Name
(RefSeq) DNA gyrase subunit B, chloroplastic/mitochondrial isoform X1
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
nto  Nicotiana tomentosiformis
Brite
KEGG Orthology (KO) [BR:nto00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nto03032]
    104088912
   03400 DNA repair and recombination proteins [BR:nto03400]
    104088912
Enzymes [BR:nto01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     104088912
DNA replication proteins [BR:nto03032]
 Prokaryotic type
  DNA Topoisomerases
   104088912
DNA repair and recombination proteins [BR:nto03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      104088912
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c TOPRIM_C HATPase_c_3 GyrB_hook
Other DBs
NCBI-GeneID: 104088912
NCBI-ProteinID: XP_009591970
Position
Unknown
AA seq 731 aa
MALLKPYPLQHSLRRMASRFLLHSHYHTHTLSFSPISLSRPSIVLNTRVINRLRRLSDAI
LIRNLVSPRAFMSSSTATEAFQENTKSKAYGSEQIQVLEGLDPVRKRPGMYIGSTGPRGL
HHLVYEILDNAVDEAQAGFATKIDVVLHADNSVSIADNGRGIPTELHPVTKKSSLETVLT
VLHAGGKFGGSSSGYNVSGGLHGVGLSVVNALSEALEVTIWRDGKEYQQKYSRGKPVTTL
ICHDLPVEMRDRQGTAIQFWPDKEVFTAEIQFDYNTIAGRIRELAFLNPELTIALKKEDI
DPEKIQCNEYFYAGGLVEYVKWLNADKKPLHDVLGFRKEADGITIDMALQWCSDAYSDMM
LGYANSIRTIDGGTHIDGVKAALTRTLNNLGKKLKTIKEKDISLSGEHVREGLTCVISVK
VTNPEFEGQTKTRLGNPEVRKVVDQSVQEYLTEYLELHPDVLDSILSKSLNALKAALAAK
RARELVRQKSVLKSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQGRDRRFQAILPL
RGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHI
RTLLLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQVYYCYDDAELKKVQRSFPSNASYN
IQRFKGLGEMMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSRVDIRKQLIQNS
ASMMNLEQLDI
NT seq 2196 nt   +upstreamnt  +downstreamnt
atggctctgctaaagccttatcctcttcaacactctcttcgccgcatggcttctcgcttt
cttcttcactctcactaccacacccatactctttccttttcccctatctctctttctcgc
ccctctattgtccttaacaccagggtgattaataggctgaggaggctatcagatgcgatt
ttgattagaaacttggtgtctccaagagcttttatgtcatcaagcactgctacagaggct
tttcaagaaaatacaaagtcaaaagcttatggttctgagcaaattcaggtattggaaggt
ttggatccagtcagaaaaaggccaggaatgtacattggaagcaccggacctcgtggtctc
caccatttggtttacgaaatattggataatgccgttgatgaggcacaagcaggatttgca
acaaagatagatgtagtccttcatgcggataactccgtgagcattgctgacaacggtcga
gggattccgacagagttgcatccagtgacaaagaaatcttctctggaaacagttttgacg
gttttgcatgcaggtggtaaatttggaggctcaagtagtggctataatgtgtctggtgga
ttacatggtgtgggcctgtcagttgttaatgcattgtcagaggcccttgaagttaccata
tggcgtgatggtaaagaataccaacagaaatattcacgtgggaagccagtaacaactttg
atatgtcatgacctcccggtggaaatgagagatcgacaagggactgccattcagttttgg
cctgataaagaagtattcacagctgaaatacaatttgactataacaccatagctgggaga
attagggagcttgctttcctcaatcccgagctcacaattgctctcaagaaggaggacata
gatccagagaagatccaatgcaacgagtacttttatgctggaggattggttgaatacgtg
aaatggctgaatgcagacaaaaaaccacttcatgatgtgctgggattcagaaaagaagct
gatggaatcacgattgatatggctcttcaatggtgctcagatgcttattcagacatgatg
ctaggttatgcaaacagcatacggacaattgatggtggcactcacatagatggtgtgaaa
gctgccctaacaagaactctcaacaatctggggaaaaagttaaagacaatcaaggagaag
gacataagcttaagtggcgagcatgtaagagagggattaacctgtgttatttctgttaaa
gttacgaatccagaatttgaaggacaaactaagactaggttgggaaatcctgaggttaga
aaggtggtcgatcagtcagttcaagagtatctgactgagtatctggaattgcatccagat
gtgctagattcaattctttccaagtcactaaatgcactaaaggcggctcttgcagcaaag
agggctcgggagttggtgagacagaaaagtgtcttaaaatcatcctctcttccggggaag
cttgctgattgttcagccacaaatcctgaagaagctgaaatattcatcgttgagggtgat
tcagctggtggaagtgcaaaacaaggtcgtgatcggcgttttcaggctatacttccttta
agaggcaaaattttgaatattgaaagaaaggatgaagcagctatgtataaaaatgaagag
attcaaaatcttattcttggtttaggacttggagttaagggggaggattttaaaaaggaa
gctctccgttatcataaaatcataattttaacagatgctgatgtcgacggtgctcatatt
cgaacgttgttgttaacctttttcttcagatatcagagagctctttttgacgaaggttgc
atatatgttggtgttccacctctctacaaggttgagaggggaaaacaagtatactactgc
tatgatgatgcagaacttaaaaaggtccagcgttccttcccttcaaatgcatcatataac
atacagagattcaaaggattgggggagatgatgccagcccagctatgggaaacaacaatg
aacccggagactaggctgttaaagcaattagtggtggaggacgcagctgaggcaaatgtt
gtcttctcttcacttatgggatccagggttgatattaggaagcaacttatacaaaattca
gcgagcatgatgaaccttgagcaactggatatatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (21)   

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