KEGG   Nicotiana tomentosiformis: 104104576
Entry
104104576         CDS       T05025                                 
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X1
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
nto  Nicotiana tomentosiformis
Pathway
nto03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nto00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104104576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nto03019]
    104104576
   03110 Chaperones and folding catalysts [BR:nto03110]
    104104576
   03029 Mitochondrial biogenesis [BR:nto03029]
    104104576
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nto04147]
    104104576
Enzymes [BR:nto01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     104104576
Messenger RNA biogenesis [BR:nto03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     104104576
Chaperones and folding catalysts [BR:nto03110]
 Heat shock proteins
  HSP60 / Chaperonin
   104104576
Mitochondrial biogenesis [BR:nto03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    104104576
Exosome [BR:nto04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104104576
  Exosomal proteins of other body fluids (saliva and urine)
   104104576
  Exosomal proteins of breast cancer cells
   104104576
  Exosomal proteins of colorectal cancer cells
   104104576
  Exosomal proteins of bladder cancer cells
   104104576
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-GeneID: 104104576
NCBI-ProteinID: XP_009611004
Position
Unknown
AA seq 612 aa
MSCSLNHLPAITLKNGSVHRTSKRVSGSMLNARAMAKELYFNHDGSTTKKLLAGVNLVAE
LVGVTMGPKGRNVVLGNKYGPPKIVNDGETVLKEIQLEDPLEHVGVKLVREAGAKTNNLA
GDGCTTSIVLARGLIAEGVKVTAMGANVVQVSRGIEKTAKALVSELKLMSREVEDHELED
VAAVSAGNDYAIGNMISEALRQVGKKGVVTIEKGNNTETSLEVVEGMQFDRGYLSPYFVT
DRRKRIVELHNCKLLLVDKKITNPKELVKILDNAVKEKYPVLIVAEGIEQDALAPVIRNK
LRGVLKVAAIKAPSFGERKSHCLDDIAILTGGTVIRDDMGLTLENAHKDLLGTASKVVIT
KDSTLIVTDGNTRAAVSKRVSQIQKLVENTEENFQKKILNERIARLSGGIAIIQVGAQTQ
VELKDKQLRIEDALNAARAATEEGVVVGGGCCLLRLSSKVDAIKEMLDNEDQKIGADIFK
RALSYPAKQIAKNAGVNGNIVVEKILSVDNMKYGYNAARDRYEDLMAAKILDPAKVVRCC
LEHAAAVAKTFLISDAVVIDIPEPVSRQMRRPPMPTSGPRLTDLTGGGARIFTKGSQNIK
NNTPRRQENSTI
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgagttgttctttgaatcatttacctgcaattactttgaaaaatggttcagtacacaga
acttctaaaagggtgtctggttctatgttgaatgcaagagctatggctaaagaattgtac
tttaaccatgatggttctaccacaaagaaacttctggcaggtgtgaatttggtggcagag
ctggttggagtcacaatgggtccaaaaggaagaaatgtagtgcttggaaataagtatggt
cctcccaagattgttaatgatggtgaaactgttcttaaagagattcagctggaggatcct
ttggaacatgttggagtaaaattggttagggaagccggtgccaagactaataatcttgct
ggcgatggttgcacaacatctatagtgcttgctcggggtctaattgctgaaggtgtcaag
gttactgcaatgggcgcaaatgttgtccaagtgtctcgtggaattgagaaaacggctaaa
gccctcgtttctgagctcaagttgatgtctagagaggttgaggatcacgagctggaagac
gttgctgctgttagtgctggcaacgattatgccatcgggaacatgatttcagaagctctt
aggcaggttggaaaaaaaggtgttgtcacaattgagaaagggaacaatactgaaaccagt
ctagaagtcgtagaaggaatgcagtttgatcgtggttatttgtcaccttattttgtaact
gatcgacgaaagaggattgtggagcttcacaattgtaagttgcttttggttgataaaaaa
attacaaacccgaaggagttggtaaaaattttggacaatgcagtaaaggagaaatacccg
gttttgatagtcgcggagggcattgagcaggatgctttggctccagtaattaggaacaaa
ctcaggggtgtcctaaaggtagctgctataaaagctccatcttttggcgagcgcaagagt
cattgcttagatgacatcgctatcttgactggaggaactgtgatcagagacgacatggga
ttgactcttgaaaatgcccacaaggacttgctgggaactgcttcaaaggtggtgattact
aaggactctacattgatagttactgatggaaatactcgagcggctgttagcaagagggtt
tctcagatacaaaagcttgttgagaacacagaagaaaatttccaaaagaaaatcttgaat
gaaagaattgcaagattatctggtggtattgccatcattcaggtgggagcacaaacacag
gttgagttgaaagacaaacaactaaggattgaggatgctctcaatgcagcaagggctgct
actgaggaaggagtagtagtgggtggtggctgttgtcttctgagactatcatcaaaggtg
gatgctataaaagaaatgctagacaacgaggatcagaagataggggctgatatttttaaa
agagcactatcatatcctgcaaaacagatagcaaagaatgctggtgtaaatgggaacata
gttgtagagaagattttgtcagtggataacatgaaatatggatataatgctgcaagagac
agatatgaagatttgatggctgccaaaattttggatcctgcaaaggttgttagatgttgc
ctagagcatgcagcagcagttgcgaagaccttcctaatatctgatgctgttgttattgac
atccccgaaccggtatccagacagatgagaagaccaccaatgccaacttcaggtccaagg
ctcactgatctcacaggtggtggagccaggattttcacaaaggggagtcaaaatataaag
aataacacaccaagaagacaagagaattcaacaatataa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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