KEGG   Nasonia vitripennis (jewel wasp): 100116156
Entry
100116156         CDS       T01081                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
nvi  Nasonia vitripennis (jewel wasp)
Pathway
nvi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nvi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100116156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nvi03019]
    100116156
Messenger RNA biogenesis [BR:nvi03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100116156
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     100116156
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N RRP40_S1 EXOSC1
Other DBs
NCBI-GeneID: 100116156
NCBI-ProteinID: XP_001600703
NASONIABASE: NV17540
UniProt: A0A7M7G2L9
Position
3:complement(10486449..10487746)
AA seq 302 aa
MSEENEKEGSGIMVRLAVNRIDQNLPTHQDPQVFLYSPGEEISTQPDFLRGHGTYVDEQE
VLRASVAGRLERVNKLISVKPYKTRYQGEIGDVVIGRITEVQQKRWKVDCNAKLDAALLL
SSVNLPGGELRRRSVEDEQAMRRYLQEGDLICAEVQSIFADGSLSLHTRVLKYGKLSQGI
MLKVSPALIKRQKTHFHNLTNGACLVLGNNGYAWIGANVADTDRSEGGFTQDLSRVSQED
REVCARLRNCILSLAKSHILLSDTSVTYAYEESMKYSIHEMLIPEVQLDVALLTHQRLTI
SL
NT seq 909 nt   +upstreamnt  +downstreamnt
atgagcgaagaaaatgaaaaagagggatctgggatcatggttcgattggccgtcaatcgg
atcgatcaaaatcttcccacccatcaagatccacaagtgttcctttactctcctggagaa
gaaatatcaacgcagccagattttttgaggggtcatggaacgtatgtggacgaacaagaa
gttctgcgagcatcggttgctggtcgattggaaagagtcaacaagctgatatctgtgaag
ccttacaaaaccagataccaaggtgaaatcggagacgtcgttattggaaggataacagag
gttcagcagaaacgttggaaagttgattgtaatgccaaattggatgctgctcttcttttg
tctagtgtcaatttgccaggaggagagttgaggagaagatcagtcgaagatgagcaggca
atgagacgctatttacaagaaggagatttgatatgtgcagaagttcagagtatctttgcc
gatggctctctgtctctgcacactagagtccttaagtacggcaaattatctcaaggcatc
atgttgaaggtatcgcctgcattgattaaaaggcaaaaaactcacttccacaatctaacg
aatggagcctgcttagtcctgggaaacaatggatacgcgtggataggagccaatgttgct
gatacagacaggtcggagggtgggtttacccaggatttatccagagtcagtcaagaagac
agggaggtatgcgccagactgcgtaactgtattctgagtcttgccaaaagtcacattcta
ttgtcggacacatccgtcacttacgcctacgaggaatcgatgaagtacagcattcacgag
atgctgataccagaggtacagctcgacgtcgccttgctgacacaccagaggctcaccata
tcgttataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   NASONIABASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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