KEGG   Ornithorhynchus anatinus (platypus): 100078894
Entry
100078894         CDS       T01045                                 
Symbol
POLB
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase beta
  KO
K02330  DNA polymerase beta [EC:2.7.7.7 4.2.99.-]
Organism
oaa  Ornithorhynchus anatinus (platypus)
Pathway
oaa03410  Base excision repair
oaa05166  Human T-cell leukemia virus 1 infection
oaa05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:oaa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    100078894 (POLB)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    100078894 (POLB)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100078894 (POLB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oaa03400]
    100078894 (POLB)
Enzymes [BR:oaa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     100078894 (POLB)
DNA repair and recombination proteins [BR:oaa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     100078894 (POLB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     100078894 (POLB)
SSDB
Motif
Pfam: DNA_pol_B_palm HHH_8 DNA_pol_B_thumb DNA_pol_lambd_f HHH_5 Cdd1 HHH_2 NTP_transf_2
Other DBs
NCBI-GeneID: 100078894
NCBI-ProteinID: XP_028921390
Position
5:40483928..40515799
AA seq 335 aa
MSKRKAPQETLNVGITDFLTELANYERNVNRAIHKYNAYRKAASVIAKYPNKIKSGAEAK
KLDGVGAKIAEKIDEFLSTGKLRKLEKIRQDDTGSSINFLTRVSGIGPSAARKLVDEGIK
TLEDLRKNDXTVEHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKLDPKYIATVCGS
FRRGAESSGDMDILLTPSSFTSESAKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ
LASKDEETDYPYRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRP
IGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgagtaaacggaaagcgccccaggagacgctcaacgtgggcatcaccgatttcctgacg
gagctcgcaaactacgaaaggaatgtcaaccgggcaatccacaaatacaatgcctacaga
aaagcagcttccgtgatagccaagtacccaaacaaaataaagagtggagcagaagcaaag
aaattggatggagtaggagcaaaaattgctgaaaagatagatgagtttttatccactgga
aaattgcgtaaattggaaaagattcgacaagatgacacaggttcatccatcaatttcctg
acgagagttagtggcatcggtccatccgccgcccggaagctcgtcgatgagggaattaag
acattggaagatctaaggaaaaacgacnncacagttgaacatcatcagcgaattgggctg
aaatattttgaggactttgagaaaagaatcccccgggaagagatgttacaaatgcaagac
atcgtgctgaatgaagtcaaaaagttggatcccaaatacattgctactgtctgtgggagt
ttcaggcggggtgcagagtcaagtggagatatggatattctcctgacaccatccagcttc
acctctgagtcagctaaacagcccaaattattgcatcaagttgtggaacaattacagaag
gtccacttcatcacagatactctgtcaaagggcgaaaccaagttcatgggggtctgtcag
ctggccagcaaagatgaggaaacggattatccatacagaagaatcgatatcaggctcatc
cccaaggaccagtattactgtggtgttttgtacttcaccggcagtgatatttttaataag
aatatgagggcccatgccctagaaaaaggcttcacgatcaatgaatatacaatccgcccc
ataggagtcacgggagttgctggggaacccctcccagtagacagtgagaaagatatcttt
gactacattcagtggaaataccgtgagcccaaggacagaagcgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (36)   

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