KEGG   Oleispira antarctica: OLEAN_C00040
Entry
OLEAN_C00040      CDS       T04028                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase B, DNA topoisomerase (ATP-hydrolysing),type IIA, subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
oai  Oleispira antarctica
Brite
KEGG Orthology (KO) [BR:oai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:oai03032]
    OLEAN_C00040 (gyrB)
   03400 DNA repair and recombination proteins [BR:oai03400]
    OLEAN_C00040 (gyrB)
Enzymes [BR:oai01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     OLEAN_C00040 (gyrB)
DNA replication proteins [BR:oai03032]
 Prokaryotic type
  DNA Topoisomerases
   OLEAN_C00040 (gyrB)
DNA repair and recombination proteins [BR:oai03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      OLEAN_C00040 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: CCK74180
UniProt: R4YJF7
Position
4004..6424
AA seq 806 aa
MSEEQAYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCDT
IEVVIHLDNSISVSDNGRGIPTEIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGV
GISVVNALSEKVTLTIRRAGKIYEQEYTHGVPDYPLKEVGVSETTGTTVSFKPSDKTFTQ
TTYHYDQLAKRLRELSFLNSGVRIHLKDDRSDREDIFAFEGGLSSFVDYLNTNKSTVNDM
FHFNVMHEATGVGVEVAMQWNDTYQENVFCYTNNIPQRDGGTHMAGFRGALTRTLNNYIE
SEGLGKKEKVNATGDDAREGLTAIVSVKVPDPKFSSQTKDKLVSSEVKTAVEQEMAAKFS
EYLLEQPQQAKNLVGKMLDAARAREAARKARDMTRRKGALDIAGLPGKLADCQEKDPALS
EIYLVEGDSAGGSAKQGRDRRTQAILPLKGKILNVEKARFDKMLSSVEVGTLIKALGCGI
GREEFNIDKLRYHSIIIMTDADVDGAHIRTLLLTFFFRQMPEMVERGHIYIAQPPLYKIK
RGKQEQYLKDEQALSDYLTHIALEKSALHPNPDAPAISDHAFEKLVHKYHETQDVIDRSS
NIYPSLLLEAMLELPRITETELKDDVFANDWAEKLQALLPETGRTGSHYKVAVEKDSERN
TANFNVEVMEHGIPHNFLFNHEFFMGTGYKKIADMGEELQAVLEEGAYLQRGERVLPIEN
FKKTLAWLLAEARKGHYIQRYKGLGEMNPEQLWDTTMDPESRRMLQVTIEDAVAADQIFT
TLMGDEVEPRRKFIESNALRVANLDF
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgagtgaagaacaagcttacgattcatcgagtattaaggttttaaaaggtcttgatgca
gttcgtaaacgcccaggcatgtatattggcgatacggatgatggcactggcttacaccac
atggtatttgaagtggtcgataactctatcgatgaagccttagcgggccactgcgatact
attgaggtcgtgattcatctagataattcaatttctgtatccgataacggccgtggcatt
cctaccgaaatacacgaagaagaaggtgtatcggcagctgaagtgatcatgacagttctt
catgcgggcggaaaatttgatgataactcgtataaagtgtctggtggtttacacggcgta
ggtatctctgtagtaaacgctctatcggaaaaggttacattaactatccgtcgtgccggt
aaaatctacgaacaggaatatacccacggtgttccagactatcctcttaaagaagtcggt
gtttctgaaacgacaggcacaacggtttcattcaaaccgagtgataaaacttttacccaa
actacttatcattatgatcagttggcgaagcgtttacgtgaactctctttcttgaactct
ggggtgagaattcacctgaaagacgaccgcagcgatcgtgaagatatctttgcctttgaa
ggtggcctatcgtctttcgtagattatttgaatactaataaatctactgttaacgatatg
ttccatttcaacgttatgcatgaagcgacaggcgtgggtgttgaagttgcaatgcagtgg
aatgatacctaccaagaaaacgttttctgttataccaataacatcccacagcgtgatggt
ggaacccatatggcgggtttccgaggtgccttaacacgtactttgaataactacatcgaa
tctgaaggccttggtaagaaagagaaagtaaacgcaaccggtgatgatgcccgtgaaggt
ctaaccgcaattgtatcggttaaagtaccagatcctaagttcagctcgcagactaaagac
aagcttgtttcaagtgaagttaagaccgctgttgaacaagagatggcggctaagttctct
gaatatttattagagcaacctcagcaagcgaaaaaccttgtcggtaagatgttagatgca
gcgcgtgcgcgtgaagcggcccgtaaggctcgtgacatgactcgccgtaaaggtgcctta
gacattgcaggtctgccaggtaaactggctgactgccaagagaaagaccctgctctttcc
gaaatatacttagtggaaggagactcggctggcggttccgccaaacaaggccgagaccgt
cgtactcaagcaattttgccattgaaaggtaaaatcttaaacgtagaaaaagcacgcttc
gataagatgctttcctctgttgaagtaggcacactgattaaagcactcggctgtggtatt
ggtcgcgaagagtttaatatcgacaaacttcgttatcactctatcatcatcatgaccgat
gccgacgtcgatggtgcacacattcgtacgctactgttgaccttctttttccgtcagatg
ccagaaatggttgaacgtgggcatatttatattgcccagccaccgttgtataaaatcaag
cgtggcaagcaagaacagtatttgaaagatgagcaagccttgtctgattacctaacgcac
atcgctttagaaaaatcagctctgcacccgaatccagatgcgcctgcgattagtgatcat
gctttcgaaaagcttgtgcataaatatcatgagactcaagacgttatcgatcgctcatca
aatatttatccatcattattgttggaagcaatgttagaactgcctcgcattacagagaca
gagcttaaagatgatgtgttcgcaaacgattgggctgaaaaacttcaagccttgttacct
gaaacaggccgtacaggcagccactataaagtagccgttgagaaagacagtgagcgtaat
accgctaacttcaatgttgaagttatggagcatggtattccgcataatttccttttcaac
catgaattctttatgggaacgggctacaagaaaatcgctgacatgggtgaagaacttcaa
gcagtccttgaagaaggcgcttacctacagcgtggcgaacgcgtactgccgattgagaac
ttcaagaagactcttgcttggttgctagcagaagcccgtaaaggccattacatccagcgt
tataaaggactgggtgagatgaacccagaacagctttgggataccactatggatcctgaa
agccgtcgtatgctgcaagtaacgattgaagatgctgttgctgcggatcaaatattcacg
accttaatgggtgatgaagttgaacctcgtcgtaagtttattgaaagtaatgcattgcgc
gttgcgaacttagatttctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (40)   

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